FFCP PHASE1:Hg19::chr3:36986434..36986500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9881 | |EntrezGene=9881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29011 | |HGNC=29011 | ||
|TSSclassifier=strong | |||
|UniProt=B7WP88,O15050 | |UniProt=B7WP88,O15050 | ||
|association_with_transcript=47bp_to_ENST00000301807,ENST00000429976,ENST00000511973,NM_014831_5end | |association_with_transcript=47bp_to_ENST00000301807,ENST00000429976,ENST00000511973,NM_014831_5end | ||
|cluster_id=chr3:36986434..36986500,- | |||
|description=CAGE_peak_3_at_TRANK1_5end | |description=CAGE_peak_3_at_TRANK1_5end | ||
|id=chr3:36986434..36986500,- | |id=chr3:36986434..36986500,- | ||
|ontology_enrichment_celltype=CL:0002031!1.61e-07!124;CL:0000738!2.53e-07!140;CL:0000791!5.90e-07!18;CL:0000789!5.90e-07!18;CL:0002420!5.90e-07!18;CL:0002419!5.90e-07!18;CL:0000790!5.90e-07!18 | |ontology_enrichment_celltype=CL:0002031!1.61e-07!124;CL:0000738!2.53e-07!140;CL:0000791!5.90e-07!18;CL:0000789!5.90e-07!18;CL:0002420!5.90e-07!18;CL:0002419!5.90e-07!18;CL:0000790!5.90e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.85e-08;18!CL:0000789;5.85e-08;18!CL:0002419;5.85e-08;18 | |ontology_enrichment_celltype_v019=CL:0000791;5.85e-08;18!CL:0000789;5.85e-08;18!CL:0002419;5.85e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.42e-08,120;CL:0000738,2.84e-08,136;CL:0000791,5.98e-08,18;CL:0000789,5.98e-08,18;CL:0002420,5.98e-08,18;CL:0002419,5.98e-08,18;CL:0000790,5.98e-08,18;CL:0002087,1.61e-07,115;CL:0000766,8.81e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;5.85e-08;18 | |ontology_enrichment_development_v019=CL:0000790;5.85e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-27!115;UBERON:0001049!5.09e-17!57;UBERON:0005068!5.09e-17!57;UBERON:0006241!5.09e-17!57;UBERON:0007135!5.09e-17!57;UBERON:0002616!8.73e-16!59;UBERON:0001869!7.01e-15!32;UBERON:0002020!1.05e-14!34;UBERON:0003528!1.05e-14!34;UBERON:0001893!1.92e-14!34;UBERON:0002780!2.11e-14!41;UBERON:0001890!2.11e-14!41;UBERON:0006240!2.11e-14!41;UBERON:0003080!4.84e-14!42;UBERON:0002791!7.43e-14!33;UBERON:0002619!1.75e-13!22;UBERON:0001950!1.15e-12!20;UBERON:0000956!5.50e-12!25;UBERON:0000203!5.50e-12!25;UBERON:0000955!2.11e-11!69;UBERON:0006238!2.11e-11!69;UBERON:0002346!5.95e-11!90;UBERON:0003075!1.47e-10!86;UBERON:0007284!1.47e-10!86;UBERON:0001017!1.65e-10!82;UBERON:0005743!2.17e-10!86;UBERON:0000073!5.16e-09!94;UBERON:0001016!5.16e-09!94;UBERON:0003056!4.25e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!1.98e-27!115;UBERON:0001049!5.09e-17!57;UBERON:0005068!5.09e-17!57;UBERON:0006241!5.09e-17!57;UBERON:0007135!5.09e-17!57;UBERON:0002616!8.73e-16!59;UBERON:0001869!7.01e-15!32;UBERON:0002020!1.05e-14!34;UBERON:0003528!1.05e-14!34;UBERON:0001893!1.92e-14!34;UBERON:0002780!2.11e-14!41;UBERON:0001890!2.11e-14!41;UBERON:0006240!2.11e-14!41;UBERON:0003080!4.84e-14!42;UBERON:0002791!7.43e-14!33;UBERON:0002619!1.75e-13!22;UBERON:0001950!1.15e-12!20;UBERON:0000956!5.50e-12!25;UBERON:0000203!5.50e-12!25;UBERON:0000955!2.11e-11!69;UBERON:0006238!2.11e-11!69;UBERON:0002346!5.95e-11!90;UBERON:0003075!1.47e-10!86;UBERON:0007284!1.47e-10!86;UBERON:0001017!1.65e-10!82;UBERON:0005743!2.17e-10!86;UBERON:0000073!5.16e-09!94;UBERON:0001016!5.16e-09!94;UBERON:0003056!4.25e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.54e-15;22!UBERON:0001950;4.75e-14;20!UBERON:0001869;1.28e-13;32!UBERON:0003528;6.67e-13;34!UBERON:0002020;6.67e-13;34!UBERON:0001893;9.14e-13;34!UBERON:0002791;2.04e-12;32!UBERON:0000956;7.79e-12;25!UBERON:0000203;7.79e-12;25!UBERON:0002780;8.88e-11;41!UBERON:0001890;8.88e-11;41!UBERON:0000073;6.80e-10;53!UBERON:0002616;6.80e-10;53!UBERON:0007023;3.59e-08;114!UBERON:0001017;5.11e-07;75!UBERON:0000955;9.60e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002619;5.54e-15;22!UBERON:0001950;4.75e-14;20!UBERON:0001869;1.28e-13;32!UBERON:0003528;6.67e-13;34!UBERON:0002020;6.67e-13;34!UBERON:0001893;9.14e-13;34!UBERON:0002791;2.04e-12;32!UBERON:0000956;7.79e-12;25!UBERON:0000203;7.79e-12;25!UBERON:0002780;8.88e-11;41!UBERON:0001890;8.88e-11;41!UBERON:0000073;6.80e-10;53!UBERON:0002616;6.80e-10;53!UBERON:0007023;3.59e-08;114!UBERON:0001017;5.11e-07;75!UBERON:0000955;9.60e-07;68 | ||
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|phase1_expression=3.45188920614058,2.5692062866918,6.3429481843187,6.00439790118782,4.46961094427288,2.61701557230111,0,2.52687949370732,1.04474251279935,0.245733936501509,0,0.218441372130172,0.527533956456907,0.495065411840187,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0.61560529038394,1.02000345622126,0,0.85870796139317,0.684372125364421,0.87879847716362,0,0,0,4.32700704533794,2.30297638858328,3.40595471295367,0,0.6024118375565,0,0.232401601740905,0.995184627411951,5.87200878669694,3.32397245119126,6.01633342410425,8.46342395791822,2.23915474239924,2.26725566213286,3.09090681161024,1.30858414901608,0.755751887377619,1.94067248950253,1.39457422143411,1.23350366406548,3.09706370895104,3.16461631554365,1.2808035326455,3.07426898855161,7.58440497620561,6.45484683583826,9.47985406160392,0.752969358170419,1.36453075028923,1.79778787556068,2.75475503133812,0.962787081228281,3.83602275479425,1.9791078011203,1.19678194572979,0.426224750532694,2.32167390902867,3.40431134814684,3.11411124497787,1.25624332628372,1.5644487552606,2.6062661364614,0,3.31449872388808,2.84816148696796,3.59133986730301,4.25208599930087,4.40283155567589,0.44931452458598,1.35159203557356,1.92870704036496,5.41524213108372,4.17725022118089,4.56660384411585,3.51992488922645,3.27683166757279,4.44754626931777,2.13365111283254,2.00197993518006,5.17277195959035,1.98313461835459,3.81621501814146,4.55370375287559,2.34894875748376,4.58727873750275,10.5737062863221,4.48406850385229,4.47752944117631,3.14735632182133,6.28817220398664,7.19605246498282,0.167186495390678,3.58514493296949,4.2610302516126,3.89653456815823,0.557052284425868,2.06224135232386,3.98761010250518,2.43723477388514,0.25618263945135,1.1705341280389,4.60426132890293,8.29050053357545,2.89803085735052,6.22803565280654,5.61835738988397,12.5442628565972,0.793165398882963,4.98186641682498,5.49803912772208,4.30133476433155,6.68987370080603,1.30216690771284,4.75226022224187,5.11955404864427,5.11946444617674,4.99722906209383,6.86654030927649,4.92676798152628,7.4594494993151,8.02320587350522,5.64815175142916,19.5045493051169,0.670700859703636,2.30152611318355,2.1686349143074,2.50668955317945,3.18662341713812,2.3858578411533,1.45990461090791,1.51255707462509,1.77383517970051,0.87834785693126,4.38779902917337,0.364295288292542,0,2.92092654289215,1.0447784237956,1.72845348674525,0.715471872916026,0,0.74291500265913,0,1.72046919021225,0.694281003215189,2.26123176769604,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,2.28081631715554,0.732186172644509,0.367663080345869,0,0.267899184852239,0.898117490504679,0.450445921933289,0,0.949265659568129,0,2.63560834872127,0,0.436094052142534,1.49091585508596,1.13967460498122,12.711281358069,10.0392817262085,1.06400514659507,1.12135520028461,0,0,3.11211035399766,1.0776853765575,0.980771418680752,1.05950199351452,1.15235184896,0.234321431833797,0,0,0.448346041655403,0.469737994575059,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,1.13658359293342,0,2.96720315134268,0,0.718618141816238,0.673344455816265,0.125118519871964,0.277064115484183,2.63386572528503,2.14541457059314,3.30523729594513,0.226864366320042,3.58779271377724,2.77624605464138,3.39091041855299,4.80145753735044,2.67936576019941,8.75977836155139,3.35010341396862,3.71307930930786,0.974370051611986,7.82544700156755,3.77404584433427,3.23292113637624,2.84007674013291,1.41052937518696,0.847802961552438,0.386521706326594,0,0,0.243947412259191,0.265059536642971,0,1.24393266018445,0.504641701751257,0,0,0.643240938192885,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.6462960453256,1.47008711385542,2.53510069643662,0,0.590789906681404,2.6487785964879,1.22988438543114,0,0,2.24803506515239,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,1.507095264676,0.821860859650752,2.59859605969933,1.38895653772983,2.09279567458058,2.37061319387782,3.43394464837949,2.46217006087397,1.40402559083543,2.22946743433092,0,1.6798212819886,0.425325291727159,0.0895585227028483,0.290633938513962,0,0.985326475791887,6.16339038092582,12.0250307013648,12.5384359472756,12.624243342638,0,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.36669142910475,1.42198887333556,3.57656445851882,0,1.86156681609409,0,0,0,0,0.857867961948885,0.542621605391443,0.823240336780769,0,0.355391948742546,0,3.31583314765545,1.74306691720059,3.29910870900788,0,1.50677127429638,0,0.239624855491583,3.44585807502342,2.85273810081437,0.289562613335158,1.64381058040307,1.61154866915906,0,7.09310736726938,5.82194452120697,5.00537841491019,1.27047312111232,2.60279707715243,0,1.17261385734044,0.637938751653163,7.49007023947182,0,1.65766205374414,1.10422342547226,1.00034104211935,1.08506009479894,1.03985430765404,1.78428988797162,0.946214490203608,1.52283839490527,3.61135319673263,6.82222512167955,1.03473071292505,0,0.368738337083406,1.39013783148933,0.391602314925481,1.37257369524342,2.48121631347465,3.66714141391649,3.20182673410333,0,1.6643543951049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| ||
|short_description=p3@TRANK1 | |short_description=p3@TRANK1 | ||
}} | }} |
Latest revision as of 01:56, 18 September 2015
Short description: | p3@TRANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRANK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000301807, ENST00000429976, ENST00000511973, NM_014831_5end |
EntrezGene: | TRANK1 |
HGNC: | 29011 |
UniProt: | B7WP88O15050 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.42e-08 | 120 |
leukocyte | 2.84e-08 | 136 |
mature alpha-beta T cell | 5.98e-08 | 18 |
alpha-beta T cell | 5.98e-08 | 18 |
immature T cell | 5.98e-08 | 18 |
mature T cell | 5.98e-08 | 18 |
immature alpha-beta T cell | 5.98e-08 | 18 |
nongranular leukocyte | 1.61e-07 | 115 |
myeloid leukocyte | 8.81e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-27 | 114 |
neural tube | 4.01e-18 | 56 |
neural rod | 4.01e-18 | 56 |
future spinal cord | 4.01e-18 | 56 |
neural keel | 4.01e-18 | 56 |
regional part of nervous system | 3.07e-17 | 53 |
regional part of brain | 3.07e-17 | 53 |
cerebral hemisphere | 3.26e-15 | 32 |
regional part of cerebral cortex | 4.17e-15 | 22 |
regional part of forebrain | 8.43e-15 | 41 |
forebrain | 8.43e-15 | 41 |
anterior neural tube | 8.43e-15 | 41 |
future forebrain | 8.43e-15 | 41 |
brain grey matter | 9.72e-15 | 34 |
gray matter | 9.72e-15 | 34 |
telencephalon | 1.85e-14 | 34 |
neocortex | 3.54e-14 | 20 |
regional part of telencephalon | 1.17e-13 | 32 |
brain | 2.30e-13 | 68 |
future brain | 2.30e-13 | 68 |
central nervous system | 2.01e-12 | 81 |
neural plate | 3.20e-12 | 82 |
presumptive neural plate | 3.20e-12 | 82 |
neurectoderm | 4.77e-12 | 86 |
cerebral cortex | 6.09e-12 | 25 |
pallium | 6.09e-12 | 25 |
nervous system | 8.98e-11 | 89 |
pre-chordal neural plate | 1.53e-08 | 61 |
hematopoietic system | 3.18e-08 | 98 |
blood island | 3.18e-08 | 98 |
hemolymphoid system | 1.08e-07 | 108 |