FFCP PHASE1:Hg19::chr7:142494718..142494727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc003wbj.3_5end | |association_with_transcript=36bp_to_uc003wbj.3_5end | ||
|cluster_id=chr7:142494718..142494727,+ | |||
|coexpression_cluster_id=C861 | |coexpression_cluster_id=C861 | ||
|description=CAGE_peak_1_at_uc003wbj.3_5end | |description=CAGE_peak_1_at_uc003wbj.3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!4.35e-33!53;CL:0000051!4.35e-33!53;CL:0000838!3.64e-32!52;CL:0000084!2.10e-19!25;CL:0000827!2.10e-19!25;CL:0000791!4.03e-17!18;CL:0000789!4.03e-17!18;CL:0002420!4.03e-17!18;CL:0002419!4.03e-17!18;CL:0000790!4.03e-17!18;CL:0000236!2.01e-12!14;CL:0000945!7.41e-12!24;CL:0000826!7.41e-12!24;CL:0000625!1.87e-11!11;CL:0002087!6.40e-10!119;CL:0000738!1.23e-07!140;CL:0002031!3.85e-07!124 | |ontology_enrichment_celltype=CL:0000542!4.35e-33!53;CL:0000051!4.35e-33!53;CL:0000838!3.64e-32!52;CL:0000084!2.10e-19!25;CL:0000827!2.10e-19!25;CL:0000791!4.03e-17!18;CL:0000789!4.03e-17!18;CL:0002420!4.03e-17!18;CL:0002419!4.03e-17!18;CL:0000790!4.03e-17!18;CL:0000236!2.01e-12!14;CL:0000945!7.41e-12!24;CL:0000826!7.41e-12!24;CL:0000625!1.87e-11!11;CL:0002087!6.40e-10!119;CL:0000738!1.23e-07!140;CL:0002031!3.85e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.74e-34;18!CL:0000789;2.74e-34;18!CL:0002419;2.74e-34;18!CL:0000084;7.73e-30;25!CL:0000542;1.15e-24;53!CL:0000625;3.08e-24;11!CL:0000236;6.59e-19;13!CL:0000945;7.25e-13;24!CL:0000624;8.25e-10;6 | |ontology_enrichment_celltype_v019=CL:0000791;2.74e-34;18!CL:0000789;2.74e-34;18!CL:0002419;2.74e-34;18!CL:0000084;7.73e-30;25!CL:0000542;1.15e-24;53!CL:0000625;3.08e-24;11!CL:0000236;6.59e-19;13!CL:0000945;7.25e-13;24!CL:0000624;8.25e-10;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.40e-45,53;CL:0000051,8.40e-45,53;CL:0000838,6.51e-43,52;CL:0000791,1.11e-34,18;CL:0000789,1.11e-34,18;CL:0002420,1.11e-34,18;CL:0002419,1.11e-34,18;CL:0000790,1.11e-34,18;CL:0000084,4.18e-30,25;CL:0000827,4.18e-30,25;CL:0000625,1.48e-24,11;CL:0000236,1.01e-20,14;CL:0002087,2.77e-17,115;CL:0000738,2.37e-15,136;CL:0002031,5.45e-14,120;CL:0000945,7.05e-13,24;CL:0000826,7.05e-13,24;CL:0000037,1.45e-10,168;CL:0000624,7.35e-10,6;CL:0002032,8.46e-10,161;CL:0000837,8.46e-10,161;CL:0000988,1.50e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.74e-34;18!CL:0000051;1.15e-24;53 | |ontology_enrichment_development_v019=CL:0000790;2.74e-34;18!CL:0000051;1.15e-24;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,3.06001036866379,0,0,0,0,0.764134057479513,0.57470412614962,0.865818594450472,0,0,0.309632246632152,0,0,0,0,0.853015394924529,0.880801318004542,0.553995408531877,0,1.08505435357926,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,10.5597746676794,9.83049500271837,7.11607403090844,5.9742231159311,4.40435585739614,5.17277195959035,3.96626923670917,4.77026877267682,3.41527781465669,2.93618594685469,0.764546456250458,0,0.560508562981536,0.526768169550154,1.37696839079683,2.35806457649499,1.64481199199607,2.34061093546949,4.23698946623668,1.89379122293893,1.94826728407911,1.78256731016278,2.06224135232386,3.54454231333794,2.43723477388514,0.640456598628376,0.650296737799391,0.822189523018381,0.276350017785848,1.15921234294021,2.22429844743091,2.40786745280742,4.18142095219907,0.793165398882963,0.383220493601921,4.12352934579156,0.506039384039006,3.50421955756506,1.95325036156926,3.8018081777935,2.55977702432214,2.94369205655162,1.24930726552346,2.36777252044017,5.74789597844733,1.20964045934839,1.33720097891754,2.46201486600758,0,0,0,0,0,0,0,0,0,0.221729397462564,1.40535657109002,0.261958150995425,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0,0,0,0,1.47065232138347,1.62028389576352,0.535798369704479,0.22452937262617,0.900891843866578,0,0,1.28241220751285,0,3.87780264148325,0,0,1.2663051166458,0,0,0.709336764396714,0.560677600142307,1.06748995729705,0,0,0.404132016209064,0.326923806226917,0.908144565869588,0.576175924479999,1.64025002283658,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,5.29755719297581,0,0,0,0,0,0,2.93227474779292,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0,4.34097284313154,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,1.97030760201927,0.862510299438069,1.79680250791648,0,0,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0.195801157462741,0,0.620304078368662,0.647142602455851,1.17400313583789,0,3.32870879020994,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0,0.318203247925937,0,0,0,0.117812402345686,1.2130948894399,0,0.421258456238981,1.95053495635836,0,0,0.818999468447914,0,0,0,1.32687795048244,0,0,0,0,0.6196469961995,0.563391205064483,1.29070216983646,0.88424136911809,0,1.06428319221179,0,0,1.89736586882858,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,0.648473311192717,3.24018862342869,3.17250070517708,0,0,0,2.41544127663434,0,0,0.797131363644112,0.199579371432817,0.5745161103971,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,3.67763168115679,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,2.04386596391473,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.937057782901357,0.91227394607833,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.316553979779393,0,0,0.426905989478705,0,0,0,0,1.1524383839052,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0,0,0.0788057072991982,0,0,0,2.30298236783334,0,0,0,2.71499800876856,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,5.13790242934655,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07353103920428,0.797525143673985,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,5.6678630530234,0.478901577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| ||
|short_description=p1@uc003wbj.3 | |short_description=p1@uc003wbj.3 | ||
}} | }} |
Latest revision as of 06:57, 31 July 2015
Short description: | p1@uc003wbj.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003wbj.3_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | 36bp_to_uc003wbj.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.40e-45 | 53 |
common lymphoid progenitor | 8.40e-45 | 53 |
lymphoid lineage restricted progenitor cell | 6.51e-43 | 52 |
mature alpha-beta T cell | 1.11e-34 | 18 |
alpha-beta T cell | 1.11e-34 | 18 |
immature T cell | 1.11e-34 | 18 |
mature T cell | 1.11e-34 | 18 |
immature alpha-beta T cell | 1.11e-34 | 18 |
T cell | 4.18e-30 | 25 |
pro-T cell | 4.18e-30 | 25 |
CD8-positive, alpha-beta T cell | 1.48e-24 | 11 |
B cell | 1.01e-20 | 14 |
nongranular leukocyte | 2.77e-17 | 115 |
leukocyte | 2.37e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 5.45e-14 | 120 |
lymphocyte of B lineage | 7.05e-13 | 24 |
pro-B cell | 7.05e-13 | 24 |
hematopoietic stem cell | 1.45e-10 | 168 |
CD4-positive, alpha-beta T cell | 7.35e-10 | 6 |
hematopoietic oligopotent progenitor cell | 8.46e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.46e-10 | 161 |
hematopoietic cell | 1.50e-09 | 177 |