FFCP PHASE1:Hg19::chr10:103348031..103348092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25911 | |EntrezGene=25911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24542 | |HGNC=24542 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JQQ4,E9PDC7,Q9BVM2 | |UniProt=Q5JQQ4,E9PDC7,Q9BVM2 | ||
|association_with_transcript=0bp_to_ENST00000370147,ENST00000370148,ENST00000370149,ENST00000370151,NM_015448,uc001ktn.2_5end | |association_with_transcript=0bp_to_ENST00000370147,ENST00000370148,ENST00000370149,ENST00000370151,NM_015448,uc001ktn.2_5end | ||
|cluster_id=chr10:103348031..103348092,+ | |||
|description=CAGE_peak_1_at_DPCD_5end | |description=CAGE_peak_1_at_DPCD_5end | ||
|id=chr10:103348031..103348092,+ | |id=chr10:103348031..103348092,+ | ||
|ontology_enrichment_celltype=CL:0000680!2.01e-15!57;CL:0000056!2.01e-15!57;CL:0000355!2.01e-15!57;CL:0000187!4.12e-15!54;CL:0000393!6.89e-14!60;CL:0000211!6.89e-14!60;CL:0000055!8.68e-14!180;CL:0000183!2.19e-13!59;CL:0000359!2.05e-12!32;CL:0000192!2.14e-12!42;CL:0000514!2.14e-12!42;CL:0000222!9.94e-10!119;CL:0000220!8.50e-07!246 | |ontology_enrichment_celltype=CL:0000680!2.01e-15!57;CL:0000056!2.01e-15!57;CL:0000355!2.01e-15!57;CL:0000187!4.12e-15!54;CL:0000393!6.89e-14!60;CL:0000211!6.89e-14!60;CL:0000055!8.68e-14!180;CL:0000183!2.19e-13!59;CL:0000359!2.05e-12!32;CL:0000192!2.14e-12!42;CL:0000514!2.14e-12!42;CL:0000222!9.94e-10!119;CL:0000220!8.50e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-11;32!CL:0000192;4.41e-09;43!CL:0000187;1.57e-08;55!CL:0000393;5.36e-08;61!CL:0000211;5.36e-08;61 | |ontology_enrichment_celltype_v019=CL:0000359;1.32e-11;32!CL:0000192;4.41e-09;43!CL:0000187;1.57e-08;55!CL:0000393;5.36e-08;61!CL:0000211;5.36e-08;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.24e-15,58;CL:0000056,1.24e-15,58;CL:0000355,1.24e-15,58;CL:0000187,2.56e-15,55;CL:0000393,4.25e-14,61;CL:0000211,4.25e-14,61;CL:0000192,1.35e-12,43;CL:0000514,1.35e-12,43;CL:0000359,2.00e-12,32;CL:0000222,8.29e-10,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.41e-09;43!CL:0000355;3.15e-08;58 | |ontology_enrichment_development_v019=CL:0000514;4.41e-09;43!CL:0000355;3.15e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.17e-22!347;UBERON:0000475!4.80e-22!365;UBERON:0000483!5.43e-21!309;UBERON:0000119!6.81e-21!312;UBERON:0000025!6.01e-18!194;UBERON:0000477!3.24e-16!286;UBERON:0000914!7.96e-16!83;UBERON:0002329!7.96e-16!83;UBERON:0003077!7.96e-16!83;UBERON:0003059!7.96e-16!83;UBERON:0007282!7.96e-16!83;UBERON:0009618!7.96e-16!83;UBERON:0007285!7.96e-16!83;UBERON:0004290!1.89e-14!70;UBERON:0004111!3.25e-14!241;UBERON:0000468!1.29e-13!659;UBERON:0001134!1.31e-13!61;UBERON:0002036!1.31e-13!61;UBERON:0003082!1.31e-13!61;UBERON:0000486!4.05e-13!82;UBERON:0002385!1.06e-12!63;UBERON:0001015!1.06e-12!63;UBERON:0000383!1.06e-12!63;UBERON:0002780!7.66e-12!41;UBERON:0001890!7.66e-12!41;UBERON:0006240!7.66e-12!41;UBERON:0003075!8.25e-12!86;UBERON:0007284!8.25e-12!86;UBERON:0002346!1.85e-11!90;UBERON:0003056!2.86e-11!61;UBERON:0003080!4.60e-11!42;UBERON:0002100!4.83e-11!216;UBERON:0001049!7.24e-11!57;UBERON:0005068!7.24e-11!57;UBERON:0006241!7.24e-11!57;UBERON:0007135!7.24e-11!57;UBERON:0002616!8.05e-11!59;UBERON:0003104!1.08e-10!238;UBERON:0009142!1.08e-10!238;UBERON:0001637!1.61e-10!42;UBERON:0003509!1.61e-10!42;UBERON:0004572!1.61e-10!42;UBERON:0002020!1.73e-10!34;UBERON:0003528!1.73e-10!34;UBERON:0005256!2.17e-10!143;UBERON:0000480!2.40e-10!626;UBERON:0000955!2.60e-10!69;UBERON:0006238!2.60e-10!69;UBERON:0000922!2.82e-10!612;UBERON:0001869!2.83e-10!32;UBERON:0000467!3.14e-10!625;UBERON:0004872!7.38e-10!84;UBERON:0002050!9.17e-10!605;UBERON:0005423!9.17e-10!605;UBERON:0000033!9.67e-10!123;UBERON:0005743!1.69e-09!86;UBERON:0000923!1.76e-09!604;UBERON:0005291!1.76e-09!604;UBERON:0006598!1.76e-09!604;UBERON:0002532!1.76e-09!604;UBERON:0000490!1.77e-09!138;UBERON:0001017!2.10e-09!82;UBERON:0001893!2.34e-09!34;UBERON:0002791!4.15e-09!33;UBERON:0004573!1.13e-08!33;UBERON:0004571!1.13e-08!33;UBERON:0000073!1.56e-08!94;UBERON:0001016!1.56e-08!94;UBERON:0001981!2.49e-08!60;UBERON:0007500!2.49e-08!60;UBERON:0004537!2.49e-08!60;UBERON:0006965!2.49e-08!60;UBERON:0003914!2.72e-08!118;UBERON:0000153!4.06e-08!129;UBERON:0007811!4.06e-08!129;UBERON:0000064!5.29e-08!219;UBERON:0002619!5.74e-08!22;UBERON:0000956!1.03e-07!25;UBERON:0000203!1.03e-07!25;UBERON:0004121!1.68e-07!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173;UBERON:0002049!3.46e-07!79;UBERON:0007798!3.46e-07!79;UBERON:0000055!4.46e-07!69;UBERON:0001950!6.52e-07!20 | |ontology_enrichment_uberon=UBERON:0000481!1.17e-22!347;UBERON:0000475!4.80e-22!365;UBERON:0000483!5.43e-21!309;UBERON:0000119!6.81e-21!312;UBERON:0000025!6.01e-18!194;UBERON:0000477!3.24e-16!286;UBERON:0000914!7.96e-16!83;UBERON:0002329!7.96e-16!83;UBERON:0003077!7.96e-16!83;UBERON:0003059!7.96e-16!83;UBERON:0007282!7.96e-16!83;UBERON:0009618!7.96e-16!83;UBERON:0007285!7.96e-16!83;UBERON:0004290!1.89e-14!70;UBERON:0004111!3.25e-14!241;UBERON:0000468!1.29e-13!659;UBERON:0001134!1.31e-13!61;UBERON:0002036!1.31e-13!61;UBERON:0003082!1.31e-13!61;UBERON:0000486!4.05e-13!82;UBERON:0002385!1.06e-12!63;UBERON:0001015!1.06e-12!63;UBERON:0000383!1.06e-12!63;UBERON:0002780!7.66e-12!41;UBERON:0001890!7.66e-12!41;UBERON:0006240!7.66e-12!41;UBERON:0003075!8.25e-12!86;UBERON:0007284!8.25e-12!86;UBERON:0002346!1.85e-11!90;UBERON:0003056!2.86e-11!61;UBERON:0003080!4.60e-11!42;UBERON:0002100!4.83e-11!216;UBERON:0001049!7.24e-11!57;UBERON:0005068!7.24e-11!57;UBERON:0006241!7.24e-11!57;UBERON:0007135!7.24e-11!57;UBERON:0002616!8.05e-11!59;UBERON:0003104!1.08e-10!238;UBERON:0009142!1.08e-10!238;UBERON:0001637!1.61e-10!42;UBERON:0003509!1.61e-10!42;UBERON:0004572!1.61e-10!42;UBERON:0002020!1.73e-10!34;UBERON:0003528!1.73e-10!34;UBERON:0005256!2.17e-10!143;UBERON:0000480!2.40e-10!626;UBERON:0000955!2.60e-10!69;UBERON:0006238!2.60e-10!69;UBERON:0000922!2.82e-10!612;UBERON:0001869!2.83e-10!32;UBERON:0000467!3.14e-10!625;UBERON:0004872!7.38e-10!84;UBERON:0002050!9.17e-10!605;UBERON:0005423!9.17e-10!605;UBERON:0000033!9.67e-10!123;UBERON:0005743!1.69e-09!86;UBERON:0000923!1.76e-09!604;UBERON:0005291!1.76e-09!604;UBERON:0006598!1.76e-09!604;UBERON:0002532!1.76e-09!604;UBERON:0000490!1.77e-09!138;UBERON:0001017!2.10e-09!82;UBERON:0001893!2.34e-09!34;UBERON:0002791!4.15e-09!33;UBERON:0004573!1.13e-08!33;UBERON:0004571!1.13e-08!33;UBERON:0000073!1.56e-08!94;UBERON:0001016!1.56e-08!94;UBERON:0001981!2.49e-08!60;UBERON:0007500!2.49e-08!60;UBERON:0004537!2.49e-08!60;UBERON:0006965!2.49e-08!60;UBERON:0003914!2.72e-08!118;UBERON:0000153!4.06e-08!129;UBERON:0007811!4.06e-08!129;UBERON:0000064!5.29e-08!219;UBERON:0002619!5.74e-08!22;UBERON:0000956!1.03e-07!25;UBERON:0000203!1.03e-07!25;UBERON:0004121!1.68e-07!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173;UBERON:0002049!3.46e-07!79;UBERON:0007798!3.46e-07!79;UBERON:0000055!4.46e-07!69;UBERON:0001950!6.52e-07!20 | ||
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| ||
|short_description=p1@DPCD | |short_description=p1@DPCD | ||
}} | }} |
Latest revision as of 23:17, 15 September 2015
Short description: | p1@DPCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPCD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370147, ENST00000370148, ENST00000370149, ENST00000370151, NM_015448, uc001ktn.2_5end |
EntrezGene: | DPCD |
HGNC: | 24542 |
UniProt: | Q5JQQ4E9PDC7Q9BVM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.24e-15 | 58 |
myoblast | 1.24e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-15 | 58 |
muscle cell | 2.56e-15 | 55 |
electrically responsive cell | 4.25e-14 | 61 |
electrically active cell | 4.25e-14 | 61 |
smooth muscle cell | 1.35e-12 | 43 |
smooth muscle myoblast | 1.35e-12 | 43 |
vascular associated smooth muscle cell | 2.00e-12 | 32 |
mesodermal cell | 8.29e-10 | 121 |