FFCP PHASE1:Hg19::chr19:49950830..49950836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49950830..49950836,- | |||
|coexpression_cluster_id=C398 | |coexpression_cluster_id=C398 | ||
|description=CAGE_peak_at_chr19:49950830..49950836,- | |description=CAGE_peak_at_chr19:49950830..49950836,- | ||
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|ontology_enrichment_celltype=CL:0002570!4.55e-19!8;CL:0002617!1.82e-09!2;CL:0002583!4.51e-09!2;CL:0002195!5.10e-09!2;CL:0002571!5.10e-09!2;CL:0002334!2.04e-08!12 | |ontology_enrichment_celltype=CL:0002570!4.55e-19!8;CL:0002617!1.82e-09!2;CL:0002583!4.51e-09!2;CL:0002195!5.10e-09!2;CL:0002571!5.10e-09!2;CL:0002334!2.04e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.18e-26;2!CL:0000333;2.66e-11;5!CL:0002570;1.64e-07;8 | |ontology_enrichment_celltype_v019=CL:0000047;9.18e-26;2!CL:0000333;2.66e-11;5!CL:0002570;1.64e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.69e-07,8;CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!2.89e-10!10 | |ontology_enrichment_disease=DOID:171!2.89e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:3193;4.32e-26;2!DOID:962;4.32e-26;2!DOID:171;7.35e-21;10!DOID:1192;6.76e-18;3!DOID:3095;4.23e-10;22!DOID:2994;4.23e-10;22!DOID:169;1.22e-09;6 | |ontology_enrichment_disease_v019=DOID:3193;4.32e-26;2!DOID:962;4.32e-26;2!DOID:171;7.35e-21;10!DOID:1192;6.76e-18;3!DOID:3095;4.23e-10;22!DOID:2994;4.23e-10;22!DOID:169;1.22e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,4.32e-26,2;DOID:962,4.32e-26,2;DOID:171,6.99e-21,10;DOID:1192,6.76e-18,3;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22;DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001013!1.35e-10!14 | |ontology_enrichment_uberon=UBERON:0001013!1.35e-10!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.32e-26;2!UBERON:0002346;1.06e-13;4!UBERON:0000923;1.06e-13;4!UBERON:0010316;1.06e-13;4!UBERON:0005291;1.06e-13;4!UBERON:0000013;2.66e-11;5!UBERON:0002410;2.66e-11;5!UBERON:0002050;3.10e-11;5!UBERON:0005423;3.10e-11;5!UBERON:0000010;7.48e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0003714;4.32e-26;2!UBERON:0002346;1.06e-13;4!UBERON:0000923;1.06e-13;4!UBERON:0010316;1.06e-13;4!UBERON:0005291;1.06e-13;4!UBERON:0000013;2.66e-11;5!UBERON:0002410;2.66e-11;5!UBERON:0002050;3.10e-11;5!UBERON:0005423;3.10e-11;5!UBERON:0000010;7.48e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.32e-26,2;UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0000010,7.48e-07,8 | |||
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| ||
|short_description=p@chr19:49950830..49950836,- | |short_description=p@chr19:49950830..49950836,- | ||
}} | }} |
Latest revision as of 16:06, 27 July 2015
Short description: | p@chr19:49950830..49950836, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49950830..49950836, - |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.69e-07 | 8 |
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.32e-26 | 2 |
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
peripheral nervous system | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.32e-26 | 2 |
neurofibroma | 4.32e-26 | 2 |
neuroectodermal tumor | 6.99e-21 | 10 |
peripheral nervous system neoplasm | 6.76e-18 | 3 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |
neuroendocrine tumor | 1.22e-09 | 6 |