FFCP PHASE1:Hg19::chr1:859415..859438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:859415..859438,+ | |||
|coexpression_cluster_id=C2602 | |coexpression_cluster_id=C2602 | ||
|description=CAGE_peak_at_chr1:859415..859438,+ | |description=CAGE_peak_at_chr1:859415..859438,+ | ||
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|ontology_enrichment_celltype=CL:0000077!9.37e-07!19 | |ontology_enrichment_celltype=CL:0000077!9.37e-07!19 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:171,8.56e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0005743!1.49e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0005743!1.49e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.47e-11;10!UBERON:0001443;7.49e-10;11!UBERON:0003688;2.65e-09;6!UBERON:0002358;2.65e-09;6!UBERON:0003684;2.65e-09;6!UBERON:0001178;2.65e-09;6!UBERON:0004457;8.27e-08;9!UBERON:0000042;8.27e-08;9!UBERON:0000966;5.66e-07;5!UBERON:0005388;5.66e-07;5!UBERON:0001802;5.66e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000310;4.47e-11;10!UBERON:0001443;7.49e-10;11!UBERON:0003688;2.65e-09;6!UBERON:0002358;2.65e-09;6!UBERON:0003684;2.65e-09;6!UBERON:0001178;2.65e-09;6!UBERON:0004457;8.27e-08;9!UBERON:0000042;8.27e-08;9!UBERON:0000966;5.66e-07;5!UBERON:0005388;5.66e-07;5!UBERON:0001802;5.66e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.08e-11,10;UBERON:0001443,5.38e-10,11;UBERON:0003688,2.98e-09,6;UBERON:0002358,2.98e-09,6;UBERON:0003684,2.98e-09,6;UBERON:0001178,2.98e-09,6;UBERON:0004457,2.23e-08,12;UBERON:0000042,2.23e-08,12 | |||
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| ||
|short_description=p@chr1:859415..859438,+ | |short_description=p@chr1:859415..859438,+ | ||
}} | }} |
Latest revision as of 10:50, 28 July 2015
Short description: | p@chr1:859415..859438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:859415..859438, + |
Coexpression cluster: | C2602_Fibroblast_merkel_neuroectodermal_neuroepithelioma_Retinal_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 3.08e-11 | 10 |
chest | 5.38e-10 | 11 |
omentum | 2.98e-09 | 6 |
peritoneum | 2.98e-09 | 6 |
abdominal cavity | 2.98e-09 | 6 |
visceral peritoneum | 2.98e-09 | 6 |
cavity lining | 2.23e-08 | 12 |
serous membrane | 2.23e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.56e-07 | 10 |