FFCP PHASE1:Hg19::chr22:35029651..35029657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:35029651..35029657,- | |||
|coexpression_cluster_id=C595 | |coexpression_cluster_id=C595 | ||
|description=CAGE_peak_at_chr22:35029651..35029657,- | |description=CAGE_peak_at_chr22:35029651..35029657,- | ||
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|ontology_enrichment_celltype=CL:0000244!1.22e-09!4;CL:0000731!1.22e-09!4;CL:0002322!7.01e-08!5;CL:0000540!8.02e-07!6;CL:0000031!8.02e-07!6;CL:0000404!8.02e-07!6;CL:0002149!8.48e-07!6;CL:0002255!8.48e-07!6 | |ontology_enrichment_celltype=CL:0000244!1.22e-09!4;CL:0000731!1.22e-09!4;CL:0002322!7.01e-08!5;CL:0000540!8.02e-07!6;CL:0000031!8.02e-07!6;CL:0000404!8.02e-07!6;CL:0002149!8.48e-07!6;CL:0002255!8.48e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | ||
|ontology_enrichment_disease=DOID:3095!5.40e-07!22;DOID:2994!5.40e-07!22;DOID:3001!8.48e-07!6 | |ontology_enrichment_disease=DOID:3095!5.40e-07!22;DOID:2994!5.40e-07!22;DOID:3001!8.48e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000365!5.73e-08!5;UBERON:0000991!2.77e-07!21;UBERON:0009196!2.77e-07!21;UBERON:0009117!2.77e-07!21;UBERON:0005564!2.77e-07!21;UBERON:0004176!5.40e-07!22;UBERON:0003133!6.38e-07!48;UBERON:0005910!7.58e-07!6 | |ontology_enrichment_uberon=UBERON:0000365!5.73e-08!5;UBERON:0000991!2.77e-07!21;UBERON:0009196!2.77e-07!21;UBERON:0009117!2.77e-07!21;UBERON:0005564!2.77e-07!21;UBERON:0004176!5.40e-07!22;UBERON:0003133!6.38e-07!48;UBERON:0005910!7.58e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0000474;4.53e-08;37 | |ontology_enrichment_uberon_v019=UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0003134;4.53e-08;33!UBERON:0000474;4.53e-08;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p@chr22:35029651..35029657,- | |short_description=p@chr22:35029651..35029657,- | ||
}} | }} |
Latest revision as of 20:32, 28 July 2015
Short description: | p@chr22:35029651..35029657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:35029651..35029657, - |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 1.21e-16 | 13 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |