FFCP PHASE1:Hg19::chr19:41268880..41268892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41268880..41268892,+ | |||
|description=CAGE_peak_at_chr19:41268880..41268892,+ | |description=CAGE_peak_at_chr19:41268880..41268892,+ | ||
|id=chr19:41268880..41268892,+ | |id=chr19:41268880..41268892,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2 | |ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.78e-29,1;CL:0002625,1.78e-29,1;CL:0000216,1.78e-29,1;CL:0002262,2.05e-15,2;CL:1000398,2.05e-15,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.25e-08!22;UBERON:0000079!1.25e-08!22;UBERON:0003135!1.86e-07!11 | |ontology_enrichment_uberon=UBERON:0003101!1.25e-08!22;UBERON:0000079!1.25e-08!22;UBERON:0003135!1.86e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0004909;2.05e-15;2!UBERON:0000473;4.37e-15;8!UBERON:0003135;2.98e-11;11!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3!UBERON:0005904;2.26e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0004909;2.05e-15;2!UBERON:0000473;4.37e-15;8!UBERON:0003135;2.98e-11;11!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3!UBERON:0005904;2.26e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.78e-29,1;UBERON:0001343,1.78e-29,1;UBERON:0004910,1.78e-29,1;UBERON:0005154,1.78e-29,1;UBERON:0005295,1.78e-29,1;UBERON:0004813,1.78e-29,1;UBERON:0005297,1.78e-29,1;UBERON:0005294,1.78e-29,1;UBERON:0010141,1.78e-29,1;UBERON:0005891,1.78e-29,1;UBERON:0004909,1.78e-15,2;UBERON:0001281,2.05e-15,2;UBERON:0003497,2.05e-15,2;UBERON:0003909,2.05e-15,2;UBERON:0003835,2.05e-15,2;UBERON:0000473,3.53e-15,8;UBERON:0003135,2.55e-11,11;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3;UBERON:0005904,2.11e-08,4;UBERON:0000058,6.38e-07,19 | |||
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| ||
|short_description=p@chr19:41268880..41268892,+ | |short_description=p@chr19:41268880..41268892,+ | ||
}} | }} |
Latest revision as of 07:57, 26 July 2015
Short description: | p@chr19:41268880..41268892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41268880..41268892, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.78e-29 | 1 |
seminiferous tubule epithelial cell | 1.78e-29 | 1 |
Sertoli cell | 1.78e-29 | 1 |
endothelial cell of sinusoid | 2.05e-15 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.78e-29 | 1 |
seminiferous tubule of testis | 1.78e-29 | 1 |
epithelium of male gonad | 1.78e-29 | 1 |
epithelial cord | 1.78e-29 | 1 |
sex cord | 1.78e-29 | 1 |
seminiferous tubule epithelium | 1.78e-29 | 1 |
testis sex cord | 1.78e-29 | 1 |
genital ridge | 1.78e-29 | 1 |
primitive sex cord of indifferent gonad | 1.78e-29 | 1 |
coelomic epithelium | 1.78e-29 | 1 |
epithelium of gonad | 1.78e-15 | 2 |
hepatic sinusoid | 2.05e-15 | 2 |
abdomen blood vessel | 2.05e-15 | 2 |
sinusoid | 2.05e-15 | 2 |
abdominal segment blood vessel | 2.05e-15 | 2 |
testis | 3.53e-15 | 8 |
male reproductive organ | 2.55e-11 | 11 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
duct of male reproductive system | 2.11e-08 | 4 |
duct | 6.38e-07 | 19 |