FFCP PHASE1:Hg19::chr5:135383008..135383051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508767,ENST00000509749_5end | |association_with_transcript=0bp_to_ENST00000508767,ENST00000509749_5end | ||
|cluster_id=chr5:135383008..135383051,+ | |||
|coexpression_cluster_id=C295 | |coexpression_cluster_id=C295 | ||
|description=CAGE_peak_5_at_TGFBI_5end | |description=CAGE_peak_5_at_TGFBI_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.10e-28!180;CL:0002371!6.81e-23!591;CL:0000144!4.71e-20!625;CL:0000680!4.16e-19!57;CL:0000056!4.16e-19!57;CL:0000355!4.16e-19!57;CL:0000548!2.18e-17!679;CL:0000004!2.18e-17!679;CL:0000255!2.18e-17!679;CL:0000187!2.64e-17!54;CL:0000012!1.45e-16!682;CL:0000048!1.59e-16!430;CL:0000723!3.62e-16!436;CL:0000183!4.13e-16!59;CL:0000192!5.94e-15!42;CL:0000514!5.94e-15!42;CL:0000034!9.94e-15!444;CL:0000057!6.15e-14!75;CL:0000393!1.08e-13!60;CL:0000211!1.08e-13!60;CL:0000359!5.54e-13!32;CL:0000003!2.92e-09!722;CL:0002194!1.99e-08!63;CL:0000576!1.99e-08!63;CL:0000040!1.99e-08!63;CL:0000559!1.99e-08!63;CL:0002009!2.23e-08!65;CL:0002334!7.60e-08!12;CL:0002057!1.58e-07!42;CL:0002620!2.30e-07!23;CL:0002320!3.46e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.10e-28!180;CL:0002371!6.81e-23!591;CL:0000144!4.71e-20!625;CL:0000680!4.16e-19!57;CL:0000056!4.16e-19!57;CL:0000355!4.16e-19!57;CL:0000548!2.18e-17!679;CL:0000004!2.18e-17!679;CL:0000255!2.18e-17!679;CL:0000187!2.64e-17!54;CL:0000012!1.45e-16!682;CL:0000048!1.59e-16!430;CL:0000723!3.62e-16!436;CL:0000183!4.13e-16!59;CL:0000192!5.94e-15!42;CL:0000514!5.94e-15!42;CL:0000034!9.94e-15!444;CL:0000057!6.15e-14!75;CL:0000393!1.08e-13!60;CL:0000211!1.08e-13!60;CL:0000359!5.54e-13!32;CL:0000003!2.92e-09!722;CL:0002194!1.99e-08!63;CL:0000576!1.99e-08!63;CL:0000040!1.99e-08!63;CL:0000559!1.99e-08!63;CL:0002009!2.23e-08!65;CL:0002334!7.60e-08!12;CL:0002057!1.58e-07!42;CL:0002620!2.30e-07!23;CL:0002320!3.46e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.21e-14;32!CL:0000192;3.26e-11;43!CL:0000187;2.19e-10;55!CL:0002334;6.96e-09;12!CL:0000393;7.59e-08;61!CL:0000211;7.59e-08;61!CL:0000473;2.10e-07;39!CL:0000234;2.10e-07;39!CL:0002620;2.85e-07;23!CL:0000860;5.14e-07;33!CL:0002057;5.14e-07;33!CL:0000134;6.21e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;7.21e-14;32!CL:0000192;3.26e-11;43!CL:0000187;2.19e-10;55!CL:0002334;6.96e-09;12!CL:0000393;7.59e-08;61!CL:0000211;7.59e-08;61!CL:0000473;2.10e-07;39!CL:0000234;2.10e-07;39!CL:0002620;2.85e-07;23!CL:0000860;5.14e-07;33!CL:0002057;5.14e-07;33!CL:0000134;6.21e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.89e-23,427;CL:0000723,2.39e-22,433;CL:0000680,1.28e-20,58;CL:0000056,1.28e-20,58;CL:0000355,1.28e-20,58;CL:0000034,1.65e-20,441;CL:0000187,1.45e-18,55;CL:0000192,1.51e-15,43;CL:0000514,1.51e-15,43;CL:0000393,1.00e-14,61;CL:0000211,1.00e-14,61;CL:0000359,1.90e-14,32;CL:0000057,4.01e-14,76;CL:0002320,4.66e-11,361;CL:0000134,3.18e-10,354;CL:0000473,2.58e-09,48;CL:0000234,2.58e-09,48;CL:0000219,6.63e-09,386;CL:0002194,6.92e-09,59;CL:0000576,6.92e-09,59;CL:0000040,6.92e-09,59;CL:0000559,6.92e-09,59;CL:0002334,6.95e-09,12;CL:0002009,1.64e-08,61;CL:0000860,8.27e-08,42;CL:0002057,8.27e-08,42;CL:0002620,2.81e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.26e-11;43!CL:0000355;1.18e-10;58 | |ontology_enrichment_development_v019=CL:0000514;3.26e-11;43!CL:0000355;1.18e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.25e-20!167;UBERON:0000486!3.63e-18!82;UBERON:0001134!5.64e-17!61;UBERON:0002036!5.64e-17!61;UBERON:0003082!5.64e-17!61;UBERON:0004290!1.34e-16!70;UBERON:0000914!1.37e-16!83;UBERON:0002329!1.37e-16!83;UBERON:0003077!1.37e-16!83;UBERON:0003059!1.37e-16!83;UBERON:0007282!1.37e-16!83;UBERON:0009618!1.37e-16!83;UBERON:0007285!1.37e-16!83;UBERON:0002385!7.21e-16!63;UBERON:0001015!7.21e-16!63;UBERON:0000383!7.21e-16!63;UBERON:0000926!2.97e-15!448;UBERON:0004120!2.97e-15!448;UBERON:0006603!2.97e-15!448;UBERON:0000468!3.55e-14!659;UBERON:0000467!8.46e-12!625;UBERON:0005256!1.11e-11!143;UBERON:0000480!1.42e-11!626;UBERON:0003081!3.54e-10!216;UBERON:0000490!8.26e-10!138;UBERON:0001637!1.35e-09!42;UBERON:0003509!1.35e-09!42;UBERON:0004572!1.35e-09!42;UBERON:0002100!3.61e-09!216;UBERON:0000479!4.79e-09!787;UBERON:0004573!5.65e-09!33;UBERON:0004571!5.65e-09!33;UBERON:0000923!2.13e-08!604;UBERON:0005291!2.13e-08!604;UBERON:0006598!2.13e-08!604;UBERON:0002532!2.13e-08!604;UBERON:0002050!2.17e-08!605;UBERON:0005423!2.17e-08!605;UBERON:0000922!4.21e-08!612;UBERON:0002199!1.32e-07!45;UBERON:0002416!1.32e-07!45;UBERON:0004872!1.45e-07!84;UBERON:0002384!2.64e-07!375 | |ontology_enrichment_uberon=UBERON:0002204!6.25e-20!167;UBERON:0000486!3.63e-18!82;UBERON:0001134!5.64e-17!61;UBERON:0002036!5.64e-17!61;UBERON:0003082!5.64e-17!61;UBERON:0004290!1.34e-16!70;UBERON:0000914!1.37e-16!83;UBERON:0002329!1.37e-16!83;UBERON:0003077!1.37e-16!83;UBERON:0003059!1.37e-16!83;UBERON:0007282!1.37e-16!83;UBERON:0009618!1.37e-16!83;UBERON:0007285!1.37e-16!83;UBERON:0002385!7.21e-16!63;UBERON:0001015!7.21e-16!63;UBERON:0000383!7.21e-16!63;UBERON:0000926!2.97e-15!448;UBERON:0004120!2.97e-15!448;UBERON:0006603!2.97e-15!448;UBERON:0000468!3.55e-14!659;UBERON:0000467!8.46e-12!625;UBERON:0005256!1.11e-11!143;UBERON:0000480!1.42e-11!626;UBERON:0003081!3.54e-10!216;UBERON:0000490!8.26e-10!138;UBERON:0001637!1.35e-09!42;UBERON:0003509!1.35e-09!42;UBERON:0004572!1.35e-09!42;UBERON:0002100!3.61e-09!216;UBERON:0000479!4.79e-09!787;UBERON:0004573!5.65e-09!33;UBERON:0004571!5.65e-09!33;UBERON:0000923!2.13e-08!604;UBERON:0005291!2.13e-08!604;UBERON:0006598!2.13e-08!604;UBERON:0002532!2.13e-08!604;UBERON:0002050!2.17e-08!605;UBERON:0005423!2.17e-08!605;UBERON:0000922!4.21e-08!612;UBERON:0002199!1.32e-07!45;UBERON:0002416!1.32e-07!45;UBERON:0004872!1.45e-07!84;UBERON:0002384!2.64e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.09e-09;33!UBERON:0004571;2.09e-09;33!UBERON:0002385;9.43e-09;31!UBERON:0001015;9.43e-09;31!UBERON:0000383;9.43e-09;31!UBERON:0001637;1.97e-07;42!UBERON:0003509;1.97e-07;42!UBERON:0004572;1.97e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.09e-09;33!UBERON:0004571;2.09e-09;33!UBERON:0002385;9.43e-09;31!UBERON:0001015;9.43e-09;31!UBERON:0000383;9.43e-09;31!UBERON:0001637;1.97e-07;42!UBERON:0003509;1.97e-07;42!UBERON:0004572;1.97e-07;42 | ||
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|phase1_expression=22.8914757880901,24.4074597235721,13.6725771973092,4.00293193412522,15.1966772105278,13.9574163856059,5.06599756336621,4.42203911398782,0.783556884599516,3.93174298402414,2.09340350391728,10.9220686065086,8.44054330331051,1.8564952944007,2.31978163009541,30.2546315903299,24.1077811209591,23.3699228923959,18.0535135552488,14.8976480272913,9.79203317972414,10.657460530255,1.43117993565528,4.65373045247806,1.50651167513763,0,0,0,0.786728553697808,0.383829398097213,1.70297735647684,0.919421224478927,2.71085326900425,0.739508020333575,0,0,0,1.66198622559563,2.80762226458198,1.73608696572681,1.11957737119962,1.29557466407592,0,3.92575244704825,3.40088349319928,3.15359279544161,3.25400651667958,1.23350366406548,3.40677007984614,3.45230870786581,3.58624989140741,4.49316236788312,3.7922024881028,1.93645405075148,1.35426486594342,6.02375486536335,5.73102915121476,4.71919317334678,6.73384563215986,1.60464513538047,5.11469700639233,6.92687730392104,5.18605509816243,4.68847225585964,3.19230162491442,0.56738522469114,2.4912889959823,6.78371396193207,4.17186334736161,5.42972111762792,4.23779651843358,1.10483290796269,2.21523671208619,2.32380814943136,1.27562579979026,2.09658645508376,2.80821577866238,2.70318407114711,3.05378614724452,0.855038231223746,2.38700012638908,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,4.69490601792545,1.91793842765295,20.2405925335357,23.0615438892509,42.8745696124038,6.36228757640879,58.3961844363163,5.67208902984407,15.5210578223795,9.92533078332324,0,1.82147644146271,1.11235332835329,6.49094787309367,8.35822739036483,11.0355107230658,2.14641561874808,0.571994910780128,1.48583000531826,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0,0,0,1.20848795132744,0,0,0,2.43042584364528,0,0,0.112611480483322,0,0,0.366403487860815,0,0,2.61656431285521,24.3516256330706,10.0038104215018,3.83986624358335,28.6836620748814,4.61068896857864,8.41016400213461,14.9448594021587,30.3401084553107,0.622422070799533,1.88594940897563,1.63461903113459,3.32986340818849,5.76175924479999,0.70296429550139,4.68240115245481,1.1409436430889,1.64393548606981,0.352303495931295,0.323745888736263,0.561803226808994,0.61246251376468,0.61417158655884,1.23990937410919,0,5.19260551484969,4.55080680969013,5.03032699271367,0,0.375355559615893,0,2.19488810440419,7.04921930337745,8.71380741658261,1.36118619792025,36.9542649519056,21.5692962706753,11.2323907614568,41.1124801635631,15.5609319150043,34.7814729061599,17.681101351501,43.5442937182467,37.0260619612555,28.7774502638291,11.7823870262143,7.59736467048416,77.3920911686219,24.6842640657719,5.4259389539356,3.86521706326594,3.54569956768085,1.43402297694502,0,0,0.348581828608555,0.414644220061482,0.252320850875628,0,3.12899064659632,1.92972281457866,1.38134921352481,1.39310378409594,0.721879481669586,0.354920400119532,0.842923450390509,0.482022059766964,0.772057809126758,1.08939722046203,0.474541238222193,0.539325232640658,0.784885860501384,0,0,2.80483547606892,5.3504621473082,7.3504355692771,0,0.982827216677626,0,0,0.122988438543114,9.77936518701596,3.18275827685014,1.1240175325762,0.201057944823262,0.555530670951178,0.325808305310325,0,4.3299402607582,1.62302566965108,3.05262605013136,0.577465791044295,0,0.380508304469197,0,0,5.90920814609754,1.40402559083543,5.49935300468294,1.87467667973554,15.4543557942951,2.83550194484773,0.179117045405697,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0.336393253036082,7.84728123899904,1.1734125731352,5.17086863031111,10.7296933755565,21.977871566456,0.531876233169741,2.08014873822732,1.80045161983499,1.41849132023278,1.0656887160644,12.4390854482588,16.2786481617433,3.29296134712308,7.81766842304964,12.0833262572466,13.4631818398683,2.1100756394171,0,2.69927076191554,3.64871341923571,5.02257091432126,6.32501818449095,6.46987109827273,11.4861935834114,1.42636905040718,17.9528820267798,25.6845403187979,31.1566076037418,0,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.335032530668698,0,0,0,0,6.25726607767613,6.00204625271613,0,10.1905722150095,8.92144943985809,0.157702415033935,1.52283839490527,1.20378439891088,15.9185252839189,3.10419213877515,7.97070718242524,10.3246734383354,2.17209036170207,3.72022199179207,2.05886054286514,0.620304078368662,1.94142780736755,1.06727557803444,3.94065842880137,4.99306318531491,20.5625399464183,32.5021228242598,21.7916002069049,47.9928761480556,45.7456762842852,8.69902323413396,30.4013910961418,13.3576259800492,9.40679132196199,11.8966355959795,4.43486642474569,22.3279404548957,6.74020195067764,0,9.42380410425439,0.460404944679482,6.7740524417118,6.00900854422166,15.472680965212,0.902399225814824,1.38627606787947,0.784349769176855,1.46139224653261,2.11103257785751,0,0.510281115829547,0.647747748306418,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,3.60816110269676,0.325378394664303,0.721287081534056,0.09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| ||
|short_description=p5@TGFBI | |short_description=p5@TGFBI | ||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p5@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000508767, ENST00000509749_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.89e-23 | 427 |
somatic stem cell | 2.39e-22 | 433 |
muscle precursor cell | 1.28e-20 | 58 |
myoblast | 1.28e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-20 | 58 |
stem cell | 1.65e-20 | 441 |
muscle cell | 1.45e-18 | 55 |
smooth muscle cell | 1.51e-15 | 43 |
smooth muscle myoblast | 1.51e-15 | 43 |
electrically responsive cell | 1.00e-14 | 61 |
electrically active cell | 1.00e-14 | 61 |
vascular associated smooth muscle cell | 1.90e-14 | 32 |
fibroblast | 4.01e-14 | 76 |
connective tissue cell | 4.66e-11 | 361 |
mesenchymal cell | 3.18e-10 | 354 |
defensive cell | 2.58e-09 | 48 |
phagocyte | 2.58e-09 | 48 |
motile cell | 6.63e-09 | 386 |
monopoietic cell | 6.92e-09 | 59 |
monocyte | 6.92e-09 | 59 |
monoblast | 6.92e-09 | 59 |
promonocyte | 6.92e-09 | 59 |
preadipocyte | 6.95e-09 | 12 |
macrophage dendritic cell progenitor | 1.64e-08 | 61 |
classical monocyte | 8.27e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.27e-08 | 42 |
skin fibroblast | 2.81e-07 | 23 |