FFCP PHASE1:Hg19::chr18:56248019..56248037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:56248019..56248037,- | |||
|coexpression_cluster_id=C545 | |coexpression_cluster_id=C545 | ||
|description=CAGE_peak_at_chr18:56248019..56248037,- | |description=CAGE_peak_at_chr18:56248019..56248037,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.69e-11!180;CL:0000128!3.15e-11!7;CL:0000126!3.15e-11!7;CL:0000127!3.15e-11!7;CL:0002453!3.15e-11!7;CL:0002319!4.27e-11!25;CL:0000133!4.46e-10!59;CL:0000057!1.12e-09!75;CL:0002620!1.64e-09!23;CL:0000243!2.86e-09!15;CL:0000125!2.86e-09!15;CL:0000030!2.86e-09!15;CL:0000339!2.86e-09!15;CL:0000095!5.79e-08!17;CL:0000123!5.79e-08!17;CL:0000221!5.81e-08!71 | |ontology_enrichment_celltype=CL:0000055!2.69e-11!180;CL:0000128!3.15e-11!7;CL:0000126!3.15e-11!7;CL:0000127!3.15e-11!7;CL:0002453!3.15e-11!7;CL:0002319!4.27e-11!25;CL:0000133!4.46e-10!59;CL:0000057!1.12e-09!75;CL:0002620!1.64e-09!23;CL:0000243!2.86e-09!15;CL:0000125!2.86e-09!15;CL:0000030!2.86e-09!15;CL:0000339!2.86e-09!15;CL:0000095!5.79e-08!17;CL:0000123!5.79e-08!17;CL:0000221!5.81e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.50e-22;25!CL:0000128;2.35e-17;7!CL:0000126;2.35e-17;7!CL:0000127;2.35e-17;7!CL:0000243;1.35e-16;15!CL:0000125;1.35e-16;15!CL:0002605;9.31e-16;3!CL:0000095;1.04e-14;17!CL:0000453;1.74e-09;5!CL:0000540;1.89e-07;6!CL:0000404;1.89e-07;6!CL:0000197;2.82e-07;6!CL:0000098;2.82e-07;6!CL:0002167;2.82e-07;6!CL:0002603;3.32e-07;3!CL:0000346;3.76e-07;3!CL:1000428;3.76e-07;3 | |ontology_enrichment_celltype_v019=CL:0002319;1.50e-22;25!CL:0000128;2.35e-17;7!CL:0000126;2.35e-17;7!CL:0000127;2.35e-17;7!CL:0000243;1.35e-16;15!CL:0000125;1.35e-16;15!CL:0002605;9.31e-16;3!CL:0000095;1.04e-14;17!CL:0000453;1.74e-09;5!CL:0000540;1.89e-07;6!CL:0000404;1.89e-07;6!CL:0000197;2.82e-07;6!CL:0000098;2.82e-07;6!CL:0002167;2.82e-07;6!CL:0002603;3.32e-07;3!CL:0000346;3.76e-07;3!CL:1000428;3.76e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.10e-23,25;CL:0000133,2.53e-18,59;CL:0000128,1.53e-17,7;CL:0000126,1.53e-17,7;CL:0000127,1.53e-17,7;CL:0002453,1.53e-17,7;CL:0000243,7.70e-17,15;CL:0000125,7.70e-17,15;CL:0000030,7.70e-17,15;CL:0000339,7.70e-17,15;CL:0002605,9.38e-16,3;CL:0000095,6.29e-15,17;CL:0000123,6.29e-15,17;CL:0000221,2.05e-14,72;CL:0000047,1.29e-09,8;CL:0000453,1.58e-09,5;CL:0000333,3.25e-09,41;CL:0000540,1.39e-07,6;CL:0000031,1.39e-07,6;CL:0000404,1.39e-07,6;CL:0002603,2.22e-07,3;CL:0000346,2.77e-07,3;CL:1000428,2.77e-07,3;CL:0000197,2.77e-07,6;CL:0000098,2.77e-07,6;CL:0002167,2.77e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;1.35e-16;15!CL:0000133;8.04e-12;59!CL:0000031;1.89e-07;6!CL:0000221;2.48e-07;72 | |ontology_enrichment_development_v019=CL:0000339;1.35e-16;15!CL:0000133;8.04e-12;59!CL:0000031;1.89e-07;6!CL:0000221;2.48e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.41e-07!40 | |ontology_enrichment_uberon=UBERON:0002097!1.41e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.76e-07;3!UBERON:0001992;3.76e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000412;3.76e-07;3!UBERON:0001992;3.76e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.77e-07,3;UBERON:0001992,2.77e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,3.20114750999649,0.816002764977012,1.88072832886853,20.6089910734361,11.2237028559765,12.9308918782647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,1.0246428261164,1.18241114944293,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,1.25624332628372,1.5644487552606,2.38907729175628,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.05927344650575,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0,0,0.125118519871964,0,0,1.83892677479412,0,0,0.538168907066586,1.49490172172997,0.847727604638247,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.487185025805993,0.252433774244115,1.01254888506529,0.646584227275248,0.355009592516614,0.201504196455281,0.67824236924195,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,2.57296375277154,0,0.928735856063958,0.721879481669586,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,2.28685161800217,0,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0,0.49076596687656,1.00034104211935,0,1.66376689224646,1.07057393278297,0.473107245101804,1.17141414992713,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,1.53512174720011,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.23874448473769,0,0,0,0,0,0.494411622680279,0,0,0,0,0.613612095012929,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,5.06395354867265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,1.49494626680975,1.569042694685,1.22397861163586,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.630445658393585,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0,4.07439023612359,0,0.680117776536817,0,0,0,0,0.657852148736121,0,0.192914038270915,0,0.512483037175893,1.0362910251936,0,0,2.92290463259083,13.8179433925898,5.23409261618701,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.581207126840626,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,3.20114750999649,0.816002764977012,1.88072832886853,20.6089910734361,11.2237028559765,12.9308918782647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,1.0246428261164,1.18241114944293,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,1.25624332628372,1.5644487552606,2.38907729175628,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.05927344650575,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0,0,0.125118519871964,0,0,1.83892677479412,0,0,0.538168907066586,1.49490172172997,0.847727604638247,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.487185025805993,0.252433774244115,1.01254888506529,0.646584227275248,0.355009592516614,0.201504196455281,0.67824236924195,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,2.57296375277154,0,0.928735856063958,0.721879481669586,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0,0,0,2.28685161800217,0,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0,0.49076596687656,1.00034104211935,0,1.66376689224646,1.07057393278297,0.473107245101804,1.17141414992713,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.128139149255701,1.53512174720011,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.23874448473769,0,0,0,0,0,0.494411622680279,0,0,0,0,0.613612095012929,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,5.06395354867265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,1.49494626680975,1.569042694685,1.22397861163586,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.630445658393585,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0,4.07439023612359,0,0.680117776536817,0,0,0,0,0.657852148736121,0,0.192914038270915,0,0.512483037175893,1.0362910251936,0,0,2.92290463259083,13.8179433925898,5.23409261618701,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.581207126840626,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:56248019..56248037,- | |short_description=p@chr18:56248019..56248037,- | ||
}} | }} |
Latest revision as of 01:36, 26 July 2015
Short description: | p@chr18:56248019..56248037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56248019..56248037, - |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.10e-23 | 25 |
neurectodermal cell | 2.53e-18 | 59 |
oligodendrocyte | 1.53e-17 | 7 |
macroglial cell | 1.53e-17 | 7 |
astrocyte | 1.53e-17 | 7 |
oligodendrocyte precursor cell | 1.53e-17 | 7 |
glial cell (sensu Vertebrata) | 7.70e-17 | 15 |
glial cell | 7.70e-17 | 15 |
glioblast | 7.70e-17 | 15 |
glioblast (sensu Vertebrata) | 7.70e-17 | 15 |
astrocyte of the cerebral cortex | 9.38e-16 | 3 |
neuron associated cell | 6.29e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 6.29e-15 | 17 |
ectodermal cell | 2.05e-14 | 72 |
neuronal stem cell | 1.29e-09 | 8 |
Langerhans cell | 1.58e-09 | 5 |
migratory neural crest cell | 3.25e-09 | 41 |
neuron | 1.39e-07 | 6 |
neuroblast | 1.39e-07 | 6 |
electrically signaling cell | 1.39e-07 | 6 |
astrocyte of the cerebellum | 2.22e-07 | 3 |
hair follicle dermal papilla cell | 2.77e-07 | 3 |
stem cell of epidermis | 2.77e-07 | 3 |
receptor cell | 2.77e-07 | 6 |
sensory epithelial cell | 2.77e-07 | 6 |
olfactory epithelial cell | 2.77e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.77e-07 | 3 |
papillary layer of dermis | 2.77e-07 | 3 |