FFCP PHASE1:Hg19::chr20:4004363..4004364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:4004363..4004364,+
|short_description=p1@FTLP3
|description=CAGE_peak_1_at_FTLP3_5end
|association_with_transcript=-187bp_to_ENST00000544072_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4000 | |HGNC=4000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_ENST00000544072_5end | |||
|cluster_id=chr20:4004363..4004364,+ | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_1_at_FTLP3_5end | |||
|id=chr20:4004363..4004364,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.12e-23!63;CL:0000576!2.12e-23!63;CL:0000040!2.12e-23!63;CL:0000559!2.12e-23!63;CL:0002009!2.19e-22!65;CL:0000839!5.27e-20!70;CL:0000557!3.70e-19!71;CL:0000766!6.44e-19!76;CL:0002057!2.61e-18!42;CL:0000048!6.94e-18!430;CL:0002371!3.27e-17!591;CL:0000723!5.91e-17!436;CL:0000860!6.71e-17!45;CL:0000034!5.46e-16!444;CL:0000144!2.26e-14!625;CL:0000548!7.53e-14!679;CL:0000004!7.53e-14!679;CL:0000255!7.53e-14!679;CL:0000012!5.74e-13!682;CL:0002320!6.91e-13!365;CL:0000763!8.15e-13!112;CL:0000049!8.15e-13!112;CL:0000134!2.31e-11!358;CL:0000003!3.77e-10!722;CL:0000063!7.11e-09!578;CL:0000219!3.63e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.10e-16;39!CL:0000234;1.10e-16;39!CL:0000860;6.62e-16;33!CL:0002057;6.62e-16;33!CL:0000576;1.26e-13;48!CL:0000766;2.46e-09;69!CL:0000134;5.15e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.10e-24,59;CL:0000576,1.10e-24,59;CL:0000040,1.10e-24,59;CL:0000559,1.10e-24,59;CL:0002009,1.45e-23,61;CL:0000473,2.79e-22,48;CL:0000234,2.79e-22,48;CL:0000839,5.85e-21,66;CL:0000557,4.36e-20,67;CL:0000766,1.04e-19,72;CL:0000860,2.60e-18,42;CL:0002057,2.60e-18,42;CL:0000048,3.07e-18,427;CL:0000723,2.82e-17,433;CL:0000034,2.60e-16,441;CL:0000763,3.70e-13,108;CL:0000049,3.70e-13,108;CL:0002320,4.54e-13,361;CL:0000134,1.56e-11,354;CL:0000219,2.89e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.09e-22!115;UBERON:0002371!3.93e-20!80;UBERON:0000926!7.95e-20!448;UBERON:0004120!7.95e-20!448;UBERON:0006603!7.95e-20!448;UBERON:0002193!1.03e-19!112;UBERON:0002204!3.94e-19!167;UBERON:0002390!1.70e-18!102;UBERON:0003061!1.70e-18!102;UBERON:0001474!6.15e-18!86;UBERON:0003081!7.74e-17!216;UBERON:0004765!2.68e-16!101;UBERON:0001434!2.68e-16!101;UBERON:0002384!3.85e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.14e-22,315;UBERON:0004120,2.14e-22,315;UBERON:0006603,2.14e-22,315;UBERON:0002371,5.61e-21,76;UBERON:0002204,1.47e-20,167;UBERON:0002193,2.69e-20,108;UBERON:0002405,3.20e-19,93;UBERON:0002390,4.21e-19,98;UBERON:0003061,4.21e-19,98;UBERON:0001474,1.27e-18,82;UBERON:0004765,5.40e-18,90;UBERON:0001434,8.86e-18,100;UBERON:0003081,2.59e-17,203;UBERON:0002384,2.55e-13,371 | |||
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| ||
|short_description=p1@FTLP3 | |||
}} | }} |
Latest revision as of 06:00, 16 September 2015
Short description: | p1@FTLP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTLP3_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | -187bp_to_ENST00000544072_5end |
EntrezGene: | NA |
HGNC: | 4000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.10e-24 | 59 |
monocyte | 1.10e-24 | 59 |
monoblast | 1.10e-24 | 59 |
promonocyte | 1.10e-24 | 59 |
macrophage dendritic cell progenitor | 1.45e-23 | 61 |
defensive cell | 2.79e-22 | 48 |
phagocyte | 2.79e-22 | 48 |
myeloid lineage restricted progenitor cell | 5.85e-21 | 66 |
granulocyte monocyte progenitor cell | 4.36e-20 | 67 |
myeloid leukocyte | 1.04e-19 | 72 |
classical monocyte | 2.60e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.60e-18 | 42 |
multi fate stem cell | 3.07e-18 | 427 |
somatic stem cell | 2.82e-17 | 433 |
stem cell | 2.60e-16 | 441 |
myeloid cell | 3.70e-13 | 108 |
common myeloid progenitor | 3.70e-13 | 108 |
connective tissue cell | 4.54e-13 | 361 |
mesenchymal cell | 1.56e-11 | 354 |
motile cell | 2.89e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.14e-22 | 315 |
mesoderm-derived structure | 2.14e-22 | 315 |
presumptive mesoderm | 2.14e-22 | 315 |
bone marrow | 5.61e-21 | 76 |
musculoskeletal system | 1.47e-20 | 167 |
hemolymphoid system | 2.69e-20 | 108 |
immune system | 3.20e-19 | 93 |
hematopoietic system | 4.21e-19 | 98 |
blood island | 4.21e-19 | 98 |
bone element | 1.27e-18 | 82 |
skeletal element | 5.40e-18 | 90 |
skeletal system | 8.86e-18 | 100 |
lateral plate mesoderm | 2.59e-17 | 203 |
connective tissue | 2.55e-13 | 371 |