FFCP PHASE1:Hg19::chr1:25358982..25358992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:25358982..25358992,+ | |||
|coexpression_cluster_id=C2439 | |coexpression_cluster_id=C2439 | ||
|description=CAGE_peak_at_chr1:25358982..25358992,+ | |description=CAGE_peak_at_chr1:25358982..25358992,+ | ||
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|ontology_enrichment_development_v019=CL:0002057;1.62e-46;42!CL:0000049;3.81e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.62e-46;42!CL:0000049;3.81e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.10e-35,76;UBERON:0001474,1.72e-32,82;UBERON:0002390,4.81e-30,98;UBERON:0003061,4.81e-30,98;UBERON:0004765,2.16e-29,90;UBERON:0002405,2.30e-28,93;UBERON:0002193,5.02e-27,108;UBERON:0001434,3.31e-26,100;UBERON:0002204,1.29e-14,167;UBERON:0003081,4.64e-13,203;UBERON:0000926,2.53e-07,315;UBERON:0004120,2.53e-07,315;UBERON:0006603,2.53e-07,315 | |||
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|short_description=p@chr1:25358982..25358992,+ | |short_description=p@chr1:25358982..25358992,+ | ||
}} | }} |
Latest revision as of 06:23, 28 July 2015
Short description: | p@chr1:25358982..25358992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:25358982..25358992, + |
Coexpression cluster: | C2439_CD34_CD14_Basophils_Peripheral_Natural_CD19_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.23e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-67 | 42 |
defensive cell | 3.90e-58 | 48 |
phagocyte | 3.90e-58 | 48 |
monopoietic cell | 5.57e-46 | 59 |
monocyte | 5.57e-46 | 59 |
monoblast | 5.57e-46 | 59 |
promonocyte | 5.57e-46 | 59 |
macrophage dendritic cell progenitor | 2.07e-44 | 61 |
myeloid lineage restricted progenitor cell | 6.75e-41 | 66 |
granulocyte monocyte progenitor cell | 2.95e-40 | 67 |
myeloid leukocyte | 2.59e-37 | 72 |
nongranular leukocyte | 3.57e-28 | 115 |
myeloid cell | 4.45e-24 | 108 |
common myeloid progenitor | 4.45e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 4.51e-24 | 120 |
leukocyte | 2.11e-23 | 136 |
hematopoietic stem cell | 2.10e-18 | 168 |
hematopoietic cell | 2.55e-17 | 177 |
hematopoietic oligopotent progenitor cell | 3.09e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.09e-17 | 161 |
mesenchymal cell | 4.31e-07 | 354 |
connective tissue cell | 6.85e-07 | 361 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.10e-35 | 76 |
bone element | 1.72e-32 | 82 |
hematopoietic system | 4.81e-30 | 98 |
blood island | 4.81e-30 | 98 |
skeletal element | 2.16e-29 | 90 |
immune system | 2.30e-28 | 93 |
hemolymphoid system | 5.02e-27 | 108 |
skeletal system | 3.31e-26 | 100 |
musculoskeletal system | 1.29e-14 | 167 |
lateral plate mesoderm | 4.64e-13 | 203 |
mesoderm | 2.53e-07 | 315 |
mesoderm-derived structure | 2.53e-07 | 315 |
presumptive mesoderm | 2.53e-07 | 315 |