FFCP PHASE1:Hg19::chr15:57998849..57998867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81488 | |EntrezGene=81488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14862 | |HGNC=14862 | ||
|TSSclassifier=strong | |||
|UniProt=P0CAP2,Q9BZD3 | |UniProt=P0CAP2,Q9BZD3 | ||
|association_with_transcript=22bp_to_ENST00000299638_5end | |association_with_transcript=22bp_to_ENST00000299638_5end | ||
|cluster_id=chr15:57998849..57998867,+ | |||
|description=CAGE_peak_3_at_POLR2M_5end | |description=CAGE_peak_3_at_POLR2M_5end | ||
|id=chr15:57998849..57998867,+ | |id=chr15:57998849..57998867,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-11!115;UBERON:0001049!1.06e-07!57;UBERON:0005068!1.06e-07!57;UBERON:0006241!1.06e-07!57;UBERON:0007135!1.06e-07!57;UBERON:0003080!3.45e-07!42;UBERON:0002780!9.42e-07!41;UBERON:0001890!9.42e-07!41;UBERON:0006240!9.42e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-11!115;UBERON:0001049!1.06e-07!57;UBERON:0005068!1.06e-07!57;UBERON:0006241!1.06e-07!57;UBERON:0007135!1.06e-07!57;UBERON:0003080!3.45e-07!42;UBERON:0002780!9.42e-07!41;UBERON:0001890!9.42e-07!41;UBERON:0006240!9.42e-07!41 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-11,114;UBERON:0001049,2.43e-10,56;UBERON:0005068,2.43e-10,56;UBERON:0006241,2.43e-10,56;UBERON:0007135,2.43e-10,56;UBERON:0010314,3.87e-10,132;UBERON:0000073,7.11e-10,53;UBERON:0002616,7.11e-10,53;UBERON:0010371,2.24e-09,104;UBERON:0002780,4.31e-09,41;UBERON:0001890,4.31e-09,41;UBERON:0003080,4.31e-09,41;UBERON:0006240,4.31e-09,41;UBERON:0003075,2.48e-08,82;UBERON:0007284,2.48e-08,82;UBERON:0002346,6.52e-08,86;UBERON:0004111,6.13e-07,240;UBERON:0003528,7.08e-07,34;UBERON:0002020,7.08e-07,34;UBERON:0001893,9.01e-07,34 | |||
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| ||
|short_description=p3@POLR2M | |short_description=p3@POLR2M | ||
}} | }} |
Latest revision as of 06:35, 18 September 2015
Short description: | p3@POLR2M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLR2M_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000299638_5end |
EntrezGene: | POLR2M |
HGNC: | 14862 |
UniProt: | P0CAP2Q9BZD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-11 | 114 |
neural tube | 2.43e-10 | 56 |
neural rod | 2.43e-10 | 56 |
future spinal cord | 2.43e-10 | 56 |
neural keel | 2.43e-10 | 56 |
structure with developmental contribution from neural crest | 3.87e-10 | 132 |
regional part of nervous system | 7.11e-10 | 53 |
regional part of brain | 7.11e-10 | 53 |
ecto-epithelium | 2.24e-09 | 104 |
regional part of forebrain | 4.31e-09 | 41 |
forebrain | 4.31e-09 | 41 |
anterior neural tube | 4.31e-09 | 41 |
future forebrain | 4.31e-09 | 41 |
neural plate | 2.48e-08 | 82 |
presumptive neural plate | 2.48e-08 | 82 |
neurectoderm | 6.52e-08 | 86 |
anatomical conduit | 6.13e-07 | 240 |
brain grey matter | 7.08e-07 | 34 |
gray matter | 7.08e-07 | 34 |
telencephalon | 9.01e-07 | 34 |