FFCP PHASE1:Hg19::chr12:248037..248051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440073 | |EntrezGene=440073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29193 | |HGNC=29193 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPP2 | |UniProt=Q9UPP2 | ||
|association_with_transcript=182bp_to_AB029033_5end | |association_with_transcript=182bp_to_AB029033_5end | ||
|cluster_id=chr12:248037..248051,+ | |||
|description=CAGE_peak_4_at_IQSEC3_5end | |description=CAGE_peak_4_at_IQSEC3_5end | ||
|id=chr12:248037..248051,+ | |id=chr12:248037..248051,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.40e-10;13!CL:0000037;3.00e-09;1!CL:0001024;3.00e-09;1 | |ontology_enrichment_celltype_v019=CL:0000136;3.40e-10;13!CL:0000037;3.00e-09;1!CL:0001024;3.00e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.25e-09,1;CL:0000136,5.47e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.00e-09;1!UBERON:0010115;3.00e-09;1 | |ontology_enrichment_development_v019=UBERON:0006242;3.00e-09;1!UBERON:0010115;3.00e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-34!115;UBERON:0002780!3.41e-16!41;UBERON:0001890!3.41e-16!41;UBERON:0006240!3.41e-16!41;UBERON:0003080!1.21e-15!42;UBERON:0001893!1.37e-15!34;UBERON:0001049!2.52e-15!57;UBERON:0005068!2.52e-15!57;UBERON:0006241!2.52e-15!57;UBERON:0007135!2.52e-15!57;UBERON:0002616!2.08e-14!59;UBERON:0002791!2.08e-14!33;UBERON:0001869!5.53e-14!32;UBERON:0002020!7.11e-14!34;UBERON:0003528!7.11e-14!34;UBERON:0002619!7.69e-14!22;UBERON:0003075!8.96e-14!86;UBERON:0007284!8.96e-14!86;UBERON:0002346!1.03e-12!90;UBERON:0001017!1.49e-12!82;UBERON:0005743!1.88e-12!86;UBERON:0000955!5.94e-12!69;UBERON:0006238!5.94e-12!69;UBERON:0000956!1.02e-11!25;UBERON:0000203!1.02e-11!25;UBERON:0003056!1.78e-11!61;UBERON:0001950!2.49e-11!20;UBERON:0000073!2.16e-10!94;UBERON:0001016!2.16e-10!94;UBERON:0000153!5.18e-08!129;UBERON:0007811!5.18e-08!129;UBERON:0000200!8.56e-08!6;UBERON:0001871!2.30e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.62e-34!115;UBERON:0002780!3.41e-16!41;UBERON:0001890!3.41e-16!41;UBERON:0006240!3.41e-16!41;UBERON:0003080!1.21e-15!42;UBERON:0001893!1.37e-15!34;UBERON:0001049!2.52e-15!57;UBERON:0005068!2.52e-15!57;UBERON:0006241!2.52e-15!57;UBERON:0007135!2.52e-15!57;UBERON:0002616!2.08e-14!59;UBERON:0002791!2.08e-14!33;UBERON:0001869!5.53e-14!32;UBERON:0002020!7.11e-14!34;UBERON:0003528!7.11e-14!34;UBERON:0002619!7.69e-14!22;UBERON:0003075!8.96e-14!86;UBERON:0007284!8.96e-14!86;UBERON:0002346!1.03e-12!90;UBERON:0001017!1.49e-12!82;UBERON:0005743!1.88e-12!86;UBERON:0000955!5.94e-12!69;UBERON:0006238!5.94e-12!69;UBERON:0000956!1.02e-11!25;UBERON:0000203!1.02e-11!25;UBERON:0003056!1.78e-11!61;UBERON:0001950!2.49e-11!20;UBERON:0000073!2.16e-10!94;UBERON:0001016!2.16e-10!94;UBERON:0000153!5.18e-08!129;UBERON:0007811!5.18e-08!129;UBERON:0000200!8.56e-08!6;UBERON:0001871!2.30e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002360;8.91e-17;2!UBERON:0000094;8.91e-17;2!UBERON:0010743;8.91e-17;2!UBERON:0000200;7.18e-13;6!UBERON:0002619;2.43e-12;22!UBERON:0000956;7.34e-11;25!UBERON:0000203;7.34e-11;25!UBERON:0001950;1.15e-09;20!UBERON:0002363;3.00e-09;1!UBERON:0005795;3.00e-09;1!UBERON:0002135;3.00e-09;1!UBERON:0007190;3.00e-09;1!UBERON:0001869;6.35e-09;32!UBERON:0001893;7.20e-09;34!UBERON:0001872;2.04e-07;5!UBERON:0002791;3.10e-07;32!UBERON:0003528;5.02e-07;34!UBERON:0002020;5.02e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002360;8.91e-17;2!UBERON:0000094;8.91e-17;2!UBERON:0010743;8.91e-17;2!UBERON:0000200;7.18e-13;6!UBERON:0002619;2.43e-12;22!UBERON:0000956;7.34e-11;25!UBERON:0000203;7.34e-11;25!UBERON:0001950;1.15e-09;20!UBERON:0002363;3.00e-09;1!UBERON:0005795;3.00e-09;1!UBERON:0002135;3.00e-09;1!UBERON:0007190;3.00e-09;1!UBERON:0001869;6.35e-09;32!UBERON:0001893;7.20e-09;34!UBERON:0001872;2.04e-07;5!UBERON:0002791;3.10e-07;32!UBERON:0003528;5.02e-07;34!UBERON:0002020;5.02e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,1.99e-16,2;UBERON:0000094,1.99e-16,2;UBERON:0010743,1.99e-16,2;UBERON:0000200,9.92e-13,6;UBERON:0002619,2.48e-12,22;UBERON:0001869,2.95e-11,32;UBERON:0000956,7.49e-11,25;UBERON:0000203,7.49e-11,25;UBERON:0001893,1.44e-10,34;UBERON:0001950,1.29e-09,20;UBERON:0002135,1.56e-09,1;UBERON:0007190,4.87e-09,1;UBERON:0002363,5.28e-09,1;UBERON:0007645,5.28e-09,1;UBERON:0007647,5.28e-09,1;UBERON:0010115,5.28e-09,1;UBERON:0002780,1.13e-08,41;UBERON:0001890,1.13e-08,41;UBERON:0003080,1.13e-08,41;UBERON:0006240,1.13e-08,41;UBERON:0002791,1.92e-08,32;UBERON:0007023,5.57e-08,114;UBERON:0003528,6.24e-08,34;UBERON:0002020,6.24e-08,34;UBERON:0001872,2.59e-07,5 | |||
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| ||
|short_description=p4@IQSEC3 | |short_description=p4@IQSEC3 | ||
}} | }} |
Latest revision as of 21:20, 17 September 2015
Short description: | p4@IQSEC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IQSEC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 182bp_to_AB029033_5end |
EntrezGene: | IQSEC3 |
HGNC: | 29193 |
UniProt: | Q9UPP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.25e-09 | 1 |
fat cell | 5.47e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
meninx | 1.99e-16 | 2 |
membrane organ | 1.99e-16 | 2 |
meningeal cluster | 1.99e-16 | 2 |
gyrus | 9.92e-13 | 6 |
regional part of cerebral cortex | 2.48e-12 | 22 |
cerebral hemisphere | 2.95e-11 | 32 |
cerebral cortex | 7.49e-11 | 25 |
pallium | 7.49e-11 | 25 |
telencephalon | 1.44e-10 | 34 |
neocortex | 1.29e-09 | 20 |
mitral valve | 1.56e-09 | 1 |
paracentral gyrus | 4.87e-09 | 1 |
dura mater | 5.28e-09 | 1 |
future meninx | 5.28e-09 | 1 |
ectomeninx | 5.28e-09 | 1 |
future dura mater | 5.28e-09 | 1 |
regional part of forebrain | 1.13e-08 | 41 |
forebrain | 1.13e-08 | 41 |
anterior neural tube | 1.13e-08 | 41 |
future forebrain | 1.13e-08 | 41 |
regional part of telencephalon | 1.92e-08 | 32 |
adult organism | 5.57e-08 | 114 |
brain grey matter | 6.24e-08 | 34 |
gray matter | 6.24e-08 | 34 |
parietal lobe | 2.59e-07 | 5 |