FFCP PHASE1:Hg19::chr19:36249049..36249052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148137 | |EntrezGene=148137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25204 | |HGNC=25204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000544099_5end | |association_with_transcript=-1bp_to_ENST00000544099_5end | ||
|cluster_id=chr19:36249049..36249052,+ | |||
|description=CAGE_peak_3_at_C19orf55_5end | |description=CAGE_peak_3_at_C19orf55_5end | ||
|id=chr19:36249049..36249052,+ | |id=chr19:36249049..36249052,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;5.93e-17;2!CL:1000500;5.93e-17;2!CL:1000618;5.93e-17;2!CL:1001318;5.93e-17;2!CL:0002173;5.93e-17;2!CL:0000222;2.44e-09;1!CL:0002553;2.44e-09;1!CL:0002591;2.44e-09;1!CL:0000669;6.20e-09;4 | |ontology_enrichment_celltype_v019=CL:0000650;5.93e-17;2!CL:1000500;5.93e-17;2!CL:1000618;5.93e-17;2!CL:1001318;5.93e-17;2!CL:0002173;5.93e-17;2!CL:0000222;2.44e-09;1!CL:0002553;2.44e-09;1!CL:0002591;2.44e-09;1!CL:0000669;6.20e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.87e-17,2;CL:1000500,2.87e-17,2;CL:1000618,2.87e-17,2;CL:1001318,2.87e-17,2;CL:0002173,2.87e-17,2;CL:0002553,1.43e-09,1;CL:0002591,3.25e-09,1;CL:0000669,4.33e-09,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.93e-17;2!UBERON:0003838;5.93e-17;2!UBERON:0003586;5.93e-17;2!UBERON:0005169;5.93e-17;2!UBERON:0002321;5.93e-17;2!UBERON:0005215;5.93e-17;2!UBERON:0002303;5.93e-17;2!UBERON:0002319;5.93e-17;2!UBERON:0003891;6.20e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0003567;5.93e-17;2!UBERON:0003838;5.93e-17;2!UBERON:0003586;5.93e-17;2!UBERON:0005169;5.93e-17;2!UBERON:0002321;5.93e-17;2!UBERON:0005215;5.93e-17;2!UBERON:0002303;5.93e-17;2!UBERON:0002319;5.93e-17;2!UBERON:0003891;6.20e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.87e-17,2;UBERON:0003838,2.87e-17,2;UBERON:0003586,2.87e-17,2;UBERON:0005169,2.87e-17,2;UBERON:0002321,2.87e-17,2;UBERON:0005215,2.87e-17,2;UBERON:0002303,2.87e-17,2;UBERON:0002319,2.87e-17,2;UBERON:0003891,4.33e-09,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0,0.434021741431704,0,0.647787332037959,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.600707571366025,0,0.285012743741249,0.19891667719909,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,0.144846518960824,0.795285947051099,0,0.378139268656271,0,0.263504357079378,0.654895377488563,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,3.87780264148325,0,0.496971951695318,0.25326102332916,0.794455084879313,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0.302714855289863,0,0.70296429550139,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0.277064115484183,0.877955241761676,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0,0,0.646584227275248,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0.573609190778008,0.121973706129595,0.397589304964456,0.116193942869518,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0.882926198829301,0.368965315629341,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0.358234090811393,0,0,0,0.352193736052904,0.207328115540772,1.15295962733569,0.25248486685276,0.444485260045183,0,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0.336393253036082,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0,0,0.902838299183157,0,0,0,0,0.173767228936166,0.391602314925481,0,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.907170879989041,0,0.460385919864187,0,0,0.511707249066704,0.160853921143607,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0.316654886678627,0,0.340187410553031,0,0,1.35473218771926,1.50506932156456,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0,0,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0.384380134730212,0.510450849978337,0.10115778085555,0.464845549297286,1.25924938732256,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0.606547444719948,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,1.13008116620243,1.10273068709225,0,0.438450885253763,0.578775534266688,0,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.633322905892992,0,0.379473173765715,0,0.192444225451024,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0,1.01489521846434,2.29391162142713,0,0.238231775457789,0,0,0.540031437238115,0,0.534120355637366,0,0,0.371606350251437,0.432807638929335,0.213425530045242,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,1.4098700508785,0.18714054040822,0.293016358543788,0.485442086998054,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0.921482106297696,0,0.422008249231538,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0.503865495708552,0.102268682502155,0.123084805461069,0.622079175323615,0.179736702294654,0.537063524026827,0.511572370226872,0.0986434056369336,0,0,0.96933274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| ||
|short_description=p3@C19orf55 | |short_description=p3@C19orf55 | ||
}} | }} |
Latest revision as of 13:46, 17 September 2015
Short description: | p3@C19orf55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C19orf55_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000544099_5end |
EntrezGene: | C19orf55 |
HGNC: | 25204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.87e-17 | 2 |
kidney interstitial cell | 2.87e-17 | 2 |
juxtaglomerular complex cell | 2.87e-17 | 2 |
renal interstitial pericyte | 2.87e-17 | 2 |
extraglomerular mesangial cell | 2.87e-17 | 2 |
lung fibroblast | 1.43e-09 | 1 |
smooth muscle cell of the pulmonary artery | 3.25e-09 | 1 |
pericyte cell | 4.33e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 2.87e-17 | 2 |
abdominal segment connective tissue | 2.87e-17 | 2 |
trunk connective tissue | 2.87e-17 | 2 |
interstitial tissue | 2.87e-17 | 2 |
extraglomerular mesangium | 2.87e-17 | 2 |
kidney interstitium | 2.87e-17 | 2 |
juxtaglomerular apparatus | 2.87e-17 | 2 |
mesangium | 2.87e-17 | 2 |
stroma | 4.33e-09 | 4 |