FFCP PHASE1:Hg19::chr13:38160326..38160357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38160326..38160357,- | |||
|coexpression_cluster_id=C349 | |coexpression_cluster_id=C349 | ||
|description=CAGE_peak_at_chr13:38160326..38160357,- | |description=CAGE_peak_at_chr13:38160326..38160357,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.62e-16!180;CL:0000680!1.15e-11!57;CL:0000056!1.15e-11!57;CL:0000355!1.15e-11!57;CL:0000187!1.12e-10!54;CL:0002334!2.54e-10!12;CL:0000057!3.42e-10!75;CL:0000183!4.03e-09!59;CL:0000393!7.62e-09!60;CL:0000211!7.62e-09!60;CL:0000048!1.83e-08!430;CL:0000723!2.46e-08!436;CL:0000034!1.00e-07!444;CL:0000188!1.64e-07!9 | |ontology_enrichment_celltype=CL:0000055!2.62e-16!180;CL:0000680!1.15e-11!57;CL:0000056!1.15e-11!57;CL:0000355!1.15e-11!57;CL:0000187!1.12e-10!54;CL:0002334!2.54e-10!12;CL:0000057!3.42e-10!75;CL:0000183!4.03e-09!59;CL:0000393!7.62e-09!60;CL:0000211!7.62e-09!60;CL:0000048!1.83e-08!430;CL:0000723!2.46e-08!436;CL:0000034!1.00e-07!444;CL:0000188!1.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.10e-12;3!CL:0002334;2.51e-10;12!CL:0002548;3.68e-09;6 | |ontology_enrichment_celltype_v019=CL:0002580;5.10e-12;3!CL:0002334;2.51e-10;12!CL:0002548;3.68e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,5.60e-12,3;CL:0002334,2.52e-10,12;CL:0000057,2.59e-09,76;CL:0002548,3.37e-09,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.38e-11!14 | |ontology_enrichment_disease=DOID:2394!1.38e-11!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.38e-13!63;UBERON:0001015!7.38e-13!63;UBERON:0000383!7.38e-13!63;UBERON:0001134!1.19e-12!61;UBERON:0002036!1.19e-12!61;UBERON:0003082!1.19e-12!61;UBERON:0004290!9.92e-11!70;UBERON:0000914!6.79e-10!83;UBERON:0002329!6.79e-10!83;UBERON:0003077!6.79e-10!83;UBERON:0003059!6.79e-10!83;UBERON:0007282!6.79e-10!83;UBERON:0009618!6.79e-10!83;UBERON:0007285!6.79e-10!83;UBERON:0000486!7.17e-08!82 | |ontology_enrichment_uberon=UBERON:0002385!7.38e-13!63;UBERON:0001015!7.38e-13!63;UBERON:0000383!7.38e-13!63;UBERON:0001134!1.19e-12!61;UBERON:0002036!1.19e-12!61;UBERON:0003082!1.19e-12!61;UBERON:0004290!9.92e-11!70;UBERON:0000914!6.79e-10!83;UBERON:0002329!6.79e-10!83;UBERON:0003077!6.79e-10!83;UBERON:0003059!6.79e-10!83;UBERON:0007282!6.79e-10!83;UBERON:0009618!6.79e-10!83;UBERON:0007285!6.79e-10!83;UBERON:0000486!7.17e-08!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.44246708221105,0.25326102332916,0.926864265692532,3.72887606973458,0,0,2.1349799145941,0,1.24484414159907,1.75123873690594,1.47115712802113,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0,2.04177929688038,0.538168907066586,0.640672166455702,0.635795703478686,0,0.309157587715317,0.772921620136887,0,0.168776332241266,0,1.26216887122057,0.460249493211497,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,2.1100756394171,3.48613383440118,7.19805536510811,0,0,0,0.718874566474748,2.29723871668228,0,1.15825045334063,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,3.92543775353756,1.41932173530541,0.35142424497814,0,2.27407504055985,1.03473071292505,1.99267679560631,0.553107505625109,0,0,0,0,0,0,0,0,0,4.46594054073798,2.14846762603287,4.2099014164961,2.05022638809122,0,2.73451665944133,0,0.771048469013278,0.355123450626254,0.246381468041427,1.55776328755086,0.697262270759755,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.551346289938122,0.644521469209642,0.580066775656914,0.511359764496605,1.15741646340759,0.165284915360978,0,0,0,0,2.20368642781448,0,0,0,0,0.37064843820784,1.00187420719394,0,0,0.38126038784765,0,0,0,0.78494864019923,0.359744915166629,2.19629623788844,0.824686816419805,0.606547444719948,0,0,0,0.974853958525138,0,0.136499911407986,3.39373036688911,0,0,2.65375590096488,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,4.0435146396035,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,1.10961172300523,0.189403005275089,0.251567901752575,0,0.915360273587694,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.776314784381297,0.414706207840855,2.65841714557995,1.5652351854352,0.751288044986092,5.33127297036314,0.813741466409323,0.363697318405119,0.644463342254931,0,1.59238355479446,0.400027764663154,2.40376993627955,2.69399591012735,0,0.192619830407303,0,0,3.40058888268409,0,0,0.537266523244462,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,3.02227705957126,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,3.56846940844415,0,0,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0,0,0.5290268405154,6.69591032700152,0,4.75889218336168,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0.684466602170562,0,0,1.66330178273007,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr13:38160326..38160357,- | |short_description=p@chr13:38160326..38160357,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38160326..38160357, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38160326..38160357, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 5.60e-12 | 3 |
preadipocyte | 2.52e-10 | 12 |
fibroblast | 2.59e-09 | 76 |
cardiac fibroblast | 3.37e-09 | 6 |