FFCP PHASE1:Hg19::chr12:52840487..52840511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52840487..52840511,- | |||
|coexpression_cluster_id=C405 | |coexpression_cluster_id=C405 | ||
|description=CAGE_peak_at_chr12:52840487..52840511,- | |description=CAGE_peak_at_chr12:52840487..52840511,- | ||
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|ontology_enrichment_celltype=CL:0002621!6.12e-14!3;CL:0002336!1.61e-10!1;CL:0002261!1.61e-10!1;CL:0002170!1.61e-10!1;CL:0002076!1.55e-07!43;CL:0002251!1.67e-07!21;CL:0000240!2.69e-07!6;CL:0000311!2.69e-07!6;CL:0000079!2.69e-07!6;CL:0000237!2.69e-07!6;CL:0000036!2.69e-07!6;CL:0000357!2.69e-07!6;CL:0000114!2.69e-07!6 | |ontology_enrichment_celltype=CL:0002621!6.12e-14!3;CL:0002336!1.61e-10!1;CL:0002261!1.61e-10!1;CL:0002170!1.61e-10!1;CL:0002076!1.55e-07!43;CL:0002251!1.67e-07!21;CL:0000240!2.69e-07!6;CL:0000311!2.69e-07!6;CL:0000079!2.69e-07!6;CL:0000237!2.69e-07!6;CL:0000036!2.69e-07!6;CL:0000357!2.69e-07!6;CL:0000114!2.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000312;1.48e-40;5!CL:0000240;4.27e-34;6!CL:0000311;4.27e-34;6!CL:0000079;4.27e-34;6!CL:0000237;4.27e-34;6!CL:0000362;2.62e-23;9!CL:0002159;1.43e-15;14!CL:0002077;2.32e-07;34 | |ontology_enrichment_celltype_v019=CL:0000312;1.48e-40;5!CL:0000240;4.27e-34;6!CL:0000311;4.27e-34;6!CL:0000079;4.27e-34;6!CL:0000237;4.27e-34;6!CL:0000362;2.62e-23;9!CL:0002159;1.43e-15;14!CL:0002077;2.32e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.48e-40,5;CL:0000240,4.27e-34,6;CL:0000311,4.27e-34,6;CL:0000079,4.27e-34,6;CL:0000237,4.27e-34,6;CL:0000036,4.27e-34,6;CL:0000357,4.27e-34,6;CL:0000114,4.27e-34,6;CL:0000362,2.62e-23,9;CL:0002159,1.43e-15,14;CL:0002077,2.74e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;4.27e-34;6!CL:0000114;4.27e-34;6 | |ontology_enrichment_development_v019=CL:0000357;4.27e-34;6!CL:0000114;4.27e-34;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.12e-14!3;UBERON:0007029!2.79e-11!1;UBERON:0001043!1.10e-10!4;UBERON:0009143!1.10e-10!4;UBERON:0000997!1.46e-10!1;UBERON:0005056!1.46e-10!1;UBERON:0000002!3.46e-07!6;UBERON:0001560!3.46e-07!6 | |ontology_enrichment_uberon=UBERON:0001949!6.12e-14!3;UBERON:0007029!2.79e-11!1;UBERON:0001043!1.10e-10!4;UBERON:0009143!1.10e-10!4;UBERON:0000997!1.46e-10!1;UBERON:0005056!1.46e-10!1;UBERON:0000002!3.46e-07!6;UBERON:0001560!3.46e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.22e-14;15!UBERON:0007376;1.22e-14;15!UBERON:0010371;4.53e-08;31!UBERON:0002097;2.32e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001003;1.22e-14;15!UBERON:0007376;1.22e-14;15!UBERON:0010371;4.53e-08;31!UBERON:0002097;2.32e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.22e-14,15;UBERON:0007376,1.22e-14,15;UBERON:0007383,1.22e-14,15 | |||
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|short_description=p@chr12:52840487..52840511,- | |short_description=p@chr12:52840487..52840511,- | ||
}} | }} |
Latest revision as of 09:32, 24 July 2015
Short description: | p@chr12:52840487..52840511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52840487..52840511, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.48e-40 | 5 |
stratified squamous epithelial cell | 4.27e-34 | 6 |
keratin accumulating cell | 4.27e-34 | 6 |
stratified epithelial cell | 4.27e-34 | 6 |
keratinizing barrier epithelial cell | 4.27e-34 | 6 |
epithelial fate stem cell | 4.27e-34 | 6 |
stratified epithelial stem cell | 4.27e-34 | 6 |
surface ectodermal cell | 4.27e-34 | 6 |
epidermal cell | 2.62e-23 | 9 |
general ecto-epithelial cell | 1.43e-15 | 14 |
ecto-epithelial cell | 2.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.22e-14 | 15 |
outer epithelium | 1.22e-14 | 15 |
enveloping layer of ectoderm | 1.22e-14 | 15 |