FFCP PHASE1:Hg19::chr20:3687858..3687862,-: Difference between revisions
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|id=chr20:3687858..3687862,-
|short_description=p1@SIGLEC1
|description=CAGE_peak_1_at_SIGLEC1_5end
|association_with_transcript=-83bp_to_ENST00000202578,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6614 | |EntrezGene=6614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11127 | |HGNC=11127 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZZ2 | |UniProt=Q9BZZ2 | ||
|association_with_transcript=-83bp_to_ENST00000202578,ENST00000344754,NM_023068,uc002wiz.3,uc002wja.2_5end | |||
|cluster_id=chr20:3687858..3687862,- | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_1_at_SIGLEC1_5end | |||
|id=chr20:3687858..3687862,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.58e-50;1!UBERON:0006965;6.30e-26;2!UBERON:0004872;2.11e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-21!115;UBERON:0002298!3.05e-15!8;UBERON:0001896!3.27e-15!3;UBERON:0005290!3.27e-15!3;UBERON:0010096!3.27e-15!3;UBERON:0003408!1.89e-12!10;UBERON:0004177!1.52e-11!7;UBERON:0001829!1.72e-11!2;UBERON:0002950!4.75e-11!2;UBERON:0001891!4.75e-11!2;UBERON:0009616!4.75e-11!2;UBERON:0001557!1.43e-08!19;UBERON:0001044!1.99e-08!6;UBERON:0003293!1.99e-08!6;UBERON:0003294!1.99e-08!6;UBERON:0010047!1.99e-08!6;UBERON:0000167!1.99e-08!6;UBERON:0001041!4.10e-08!98;UBERON:0001042!7.61e-08!10;UBERON:0009145!7.61e-08!10;UBERON:0002106!7.64e-08!3;UBERON:0004854!7.64e-08!3;UBERON:0009034!7.64e-08!3;UBERON:0002095!7.64e-08!3;UBERON:0004782!7.64e-08!3;UBERON:0003281!7.64e-08!3;UBERON:0009664!7.64e-08!3;UBERON:0002296!7.64e-08!3;UBERON:0005602!7.64e-08!3;UBERON:0001179!7.64e-08!3;UBERON:0006293!7.64e-08!3;UBERON:0001004!1.73e-07!72;UBERON:0004921!2.73e-07!129;UBERON:0004185!2.73e-07!129;UBERON:0006562!3.87e-07!11;UBERON:0000153!4.23e-07!129;UBERON:0007811!4.23e-07!129;UBERON:0000481!5.13e-07!347;UBERON:0000078!7.84e-07!18;UBERON:0000029!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.46e-50;1!UBERON:0001736;6.58e-50;1!UBERON:0001829;9.18e-26;2!UBERON:0001044;1.57e-09;6!UBERON:0003293;1.57e-09;6!UBERON:0003294;1.57e-09;6!UBERON:0010047;1.57e-09;6!UBERON:0003408;1.57e-09;6!UBERON:0000167;1.57e-09;6!UBERON:0001638;8.14e-07;9!UBERON:0003920;8.14e-07;9!UBERON:0004582;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.46e-50,1;UBERON:0001736,6.58e-50,1;UBERON:0006298,6.58e-50,1;UBERON:0001829,9.18e-26,2;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6;UBERON:0001638,8.37e-07,9;UBERON:0003920,8.37e-07,9;UBERON:0004582,8.37e-07,9 | |||
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|short_description=p1@SIGLEC1 | |||
}} | }} |
Latest revision as of 03:22, 16 September 2015
Short description: | p1@SIGLEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIGLEC1_5end |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | -83bp_to_ENST00000202578, ENST00000344754, NM_023068, uc002wiz.3, uc002wja.2_5end |
EntrezGene: | SIGLEC1 |
HGNC: | 11127 |
UniProt: | Q9BZZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.46e-50 | 1 |
submandibular gland | 6.58e-50 | 1 |
submandibular gland primordium | 6.58e-50 | 1 |
major salivary gland | 9.18e-26 | 2 |
saliva-secreting gland | 1.57e-09 | 6 |
gland of oral region | 1.57e-09 | 6 |
gland of foregut | 1.57e-09 | 6 |
oral gland | 1.57e-09 | 6 |
oral cavity | 1.57e-09 | 6 |
vein | 8.37e-07 | 9 |
venous blood vessel | 8.37e-07 | 9 |
venous system | 8.37e-07 | 9 |