FFCP PHASE1:Hg19::chr14:91750002..91750014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440193 | |EntrezGene=440193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19967 | |HGNC=19967 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000334448,uc001xzi.2_5end | |association_with_transcript=-35bp_to_ENST00000334448,uc001xzi.2_5end | ||
|cluster_id=chr14:91750002..91750014,- | |||
|coexpression_cluster_id=C138 | |coexpression_cluster_id=C138 | ||
|description=CAGE_peak_21_at_CCDC88C_5end | |description=CAGE_peak_21_at_CCDC88C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000819!3.08e-14!1;CL:0000785!9.25e-08!2;CL:0000955!9.25e-08!2;CL:0000818!9.25e-08!2;CL:0000954!9.25e-08!2;CL:0000816!9.25e-08!2 | |ontology_enrichment_celltype=CL:0000819!3.08e-14!1;CL:0000785!9.25e-08!2;CL:0000955!9.25e-08!2;CL:0000818!9.25e-08!2;CL:0000954!9.25e-08!2;CL:0000816!9.25e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000785;9.37e-99;1!CL:0000819;9.37e-99;1!CL:0000945;1.03e-17;24!CL:0000542;3.98e-11;53!CL:0000236;5.28e-09;13 | |ontology_enrichment_celltype_v019=CL:0000785;9.37e-99;1!CL:0000819;9.37e-99;1!CL:0000945;1.03e-17;24!CL:0000542;3.98e-11;53!CL:0000236;5.28e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.37e-99,1;CL:0000785,2.74e-50,2;CL:0000955,2.74e-50,2;CL:0000818,2.74e-50,2;CL:0000954,2.74e-50,2;CL:0000816,2.74e-50,2;CL:0000817,4.27e-34,3;CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53;CL:0000236,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-50;2!CL:0000051;3.98e-11;53 | |ontology_enrichment_development_v019=CL:0000954;2.74e-50;2!CL:0000051;3.98e-11;53 | ||
|ontology_enrichment_disease=DOID:0060073!3.08e-14!1;DOID:8675!3.08e-14!1;DOID:0060058!4.15e-12!10 | |ontology_enrichment_disease=DOID:0060073!3.08e-14!1;DOID:8675!3.08e-14!1;DOID:0060058!4.15e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.37e-99;1!DOID:8675;9.37e-99;1!DOID:0060058;2.00e-40;10!DOID:2531;8.54e-09;51!DOID:0060083;8.54e-09;51 | |ontology_enrichment_disease_v019=DOID:0060073;9.37e-99;1!DOID:8675;9.37e-99;1!DOID:0060058;2.00e-40;10!DOID:2531;8.54e-09;51!DOID:0060083;8.54e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.37e-99,1;DOID:8675,9.37e-99,1;DOID:0060058,2.00e-40,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000998!4.53e-14!1;UBERON:0006868!4.53e-14!1;UBERON:0002135!5.85e-14!1;UBERON:0002133!1.28e-07!2;UBERON:0000473!4.02e-07!8 | |ontology_enrichment_uberon=UBERON:0000998!4.53e-14!1;UBERON:0006868!4.53e-14!1;UBERON:0002135!5.85e-14!1;UBERON:0002133!1.28e-07!2;UBERON:0000473!4.02e-07!8 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p21@CCDC88C | |short_description=p21@CCDC88C | ||
}} | }} |
Latest revision as of 13:24, 16 September 2015
Short description: | p21@CCDC88C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CCDC88C_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | -35bp_to_ENST00000334448, uc001xzi.2_5end |
EntrezGene: | CCDC88C |
HGNC: | 19967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.37e-99 | 1 |
mature B cell | 2.74e-50 | 2 |
pre-B-II cell | 2.74e-50 | 2 |
transitional stage B cell | 2.74e-50 | 2 |
small pre-B-II cell | 2.74e-50 | 2 |
immature B cell | 2.74e-50 | 2 |
precursor B cell | 4.27e-34 | 3 |
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
B cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.37e-99 | 1 |
lymphosarcoma | 9.37e-99 | 1 |
lymphoma | 2.00e-40 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |