FFCP PHASE1:Hg19::chr1:153587142..153587155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153587142..153587155,- | |||
|coexpression_cluster_id=C3872 | |coexpression_cluster_id=C3872 | ||
|description=CAGE_peak_at_chr1:153587142..153587155,- | |description=CAGE_peak_at_chr1:153587142..153587155,- | ||
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|ontology_enrichment_celltype=CL:0002076!4.35e-25!43;CL:0000066!5.08e-21!254;CL:0000223!1.67e-16!59;CL:0002251!5.39e-14!21;CL:0002159!1.51e-11!13;CL:0002327!9.19e-10!4;CL:0002368!2.84e-09!13;CL:0002328!7.69e-09!3;CL:0002231!1.13e-08!3;CL:0002621!4.89e-08!3 | |ontology_enrichment_celltype=CL:0002076!4.35e-25!43;CL:0000066!5.08e-21!254;CL:0000223!1.67e-16!59;CL:0002251!5.39e-14!21;CL:0002159!1.51e-11!13;CL:0002327!9.19e-10!4;CL:0002368!2.84e-09!13;CL:0002328!7.69e-09!3;CL:0002231!1.13e-08!3;CL:0002621!4.89e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000575;2.29e-22;2!CL:0002231;5.29e-15;3!CL:0002368;5.60e-13;13!CL:0002076;1.06e-12;42!CL:0002159;2.00e-12;14!CL:0002252;4.53e-12;1!CL:0000244;2.63e-11;4!CL:0000731;2.63e-11;4!CL:0000317;9.43e-07;2!CL:1000448;9.43e-07;2!CL:0002308;9.43e-07;2!CL:0002140;9.43e-07;2 | |ontology_enrichment_celltype_v019=CL:0000575;2.29e-22;2!CL:0002231;5.29e-15;3!CL:0002368;5.60e-13;13!CL:0002076;1.06e-12;42!CL:0002159;2.00e-12;14!CL:0002252;4.53e-12;1!CL:0000244;2.63e-11;4!CL:0000731;2.63e-11;4!CL:0000317;9.43e-07;2!CL:1000448;9.43e-07;2!CL:0002308;9.43e-07;2!CL:0002140;9.43e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.30e-22,2;CL:0002076,5.80e-15,42;CL:0002231,7.02e-15,3;CL:0002368,4.64e-13,13;CL:0002159,1.88e-12,14;CL:0002252,5.05e-12,1;CL:0000244,2.13e-11,4;CL:0000731,2.13e-11,4;CL:0000223,1.38e-10,58;CL:0000066,2.75e-08,253;CL:0000317,9.44e-07,2;CL:1000448,9.44e-07,2;CL:0002308,9.44e-07,2;CL:0002140,9.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.14e-08;58!UBERON:0008814;9.43e-07;2!UBERON:0010056;9.43e-07;2 | |ontology_enrichment_development_v019=CL:0000223;1.14e-08;58!UBERON:0008814;9.43e-07;2!UBERON:0010056;9.43e-07;2 | ||
|ontology_enrichment_disease=DOID:1749!7.88e-10!14 | |ontology_enrichment_disease=DOID:1749!7.88e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.07e-11;1!DOID:3149;1.07e-11;1 | |ontology_enrichment_disease_v019=DOID:3151;1.07e-11;1!DOID:3149;1.07e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.63e-11,1;DOID:3149,1.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.02e-18!169;UBERON:0000925!3.02e-18!169;UBERON:0006595!3.02e-18!169;UBERON:0001007!4.04e-12!155;UBERON:0001555!4.04e-12!155;UBERON:0007026!4.04e-12!155;UBERON:0000161!4.68e-12!35;UBERON:0001911!9.19e-10!4;UBERON:0005333!9.19e-10!4;UBERON:0008425!9.19e-10!4;UBERON:0005311!9.19e-10!4;UBERON:0000166!9.68e-10!21;UBERON:0005153!1.12e-09!37;UBERON:0001004!1.21e-09!72;UBERON:0000344!5.07e-09!12;UBERON:0003102!6.90e-09!95;UBERON:0004815!7.69e-09!3;UBERON:0002031!7.69e-09!3;UBERON:0005911!1.40e-08!82;UBERON:0005157!1.51e-08!51;UBERON:0001723!1.97e-08!3;UBERON:0001033!1.97e-08!3;UBERON:0010056!1.97e-08!3;UBERON:0000165!2.48e-08!28;UBERON:0000930!2.48e-08!28;UBERON:0003729!2.72e-08!5;UBERON:0000974!3.11e-08!10;UBERON:0001949!4.89e-08!3;UBERON:0004921!6.91e-08!129;UBERON:0004185!6.91e-08!129;UBERON:0006562!3.23e-07!11;UBERON:0000065!5.85e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!3.02e-18!169;UBERON:0000925!3.02e-18!169;UBERON:0006595!3.02e-18!169;UBERON:0001007!4.04e-12!155;UBERON:0001555!4.04e-12!155;UBERON:0007026!4.04e-12!155;UBERON:0000161!4.68e-12!35;UBERON:0001911!9.19e-10!4;UBERON:0005333!9.19e-10!4;UBERON:0008425!9.19e-10!4;UBERON:0005311!9.19e-10!4;UBERON:0000166!9.68e-10!21;UBERON:0005153!1.12e-09!37;UBERON:0001004!1.21e-09!72;UBERON:0000344!5.07e-09!12;UBERON:0003102!6.90e-09!95;UBERON:0004815!7.69e-09!3;UBERON:0002031!7.69e-09!3;UBERON:0005911!1.40e-08!82;UBERON:0005157!1.51e-08!51;UBERON:0001723!1.97e-08!3;UBERON:0001033!1.97e-08!3;UBERON:0010056!1.97e-08!3;UBERON:0000165!2.48e-08!28;UBERON:0000930!2.48e-08!28;UBERON:0003729!2.72e-08!5;UBERON:0000974!3.11e-08!10;UBERON:0001949!4.89e-08!3;UBERON:0004921!6.91e-08!129;UBERON:0004185!6.91e-08!129;UBERON:0006562!3.23e-07!11;UBERON:0000065!5.85e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000964;1.13e-11;4!UBERON:0010409;1.13e-11;4!UBERON:0000365;3.17e-09;5!UBERON:0000974;5.95e-08;6!UBERON:0005910;7.85e-08;6!UBERON:0002419;9.43e-07;2!UBERON:0007771;9.43e-07;2!UBERON:0003297;9.43e-07;2!UBERON:0001821;9.43e-07;2!UBERON:0003487;9.43e-07;2!UBERON:0001820;9.43e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000964;1.13e-11;4!UBERON:0010409;1.13e-11;4!UBERON:0000365;3.17e-09;5!UBERON:0000974;5.95e-08;6!UBERON:0005910;7.85e-08;6!UBERON:0002419;9.43e-07;2!UBERON:0007771;9.43e-07;2!UBERON:0003297;9.43e-07;2!UBERON:0001821;9.43e-07;2!UBERON:0003487;9.43e-07;2!UBERON:0001820;9.43e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,1.13e-11,4;UBERON:0010409,1.13e-11,4;UBERON:0004348,1.13e-11,4;UBERON:0005427,1.13e-11,4;UBERON:0000365,2.68e-09,5;UBERON:0005910,6.84e-08,6;UBERON:0003102,1.86e-07,99;UBERON:0002419,9.44e-07,2;UBERON:0007771,9.44e-07,2;UBERON:0003297,9.44e-07,2;UBERON:0001821,9.44e-07,2;UBERON:0003487,9.44e-07,2;UBERON:0001820,9.44e-07,2;UBERON:0005089,9.44e-07,2;UBERON:0005088,9.44e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91436230634034,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.658501712451753,0,1.70899253099772,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,1.20303882181971,2.85451065701279,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,1.4875642382488,1.92190067365106,0,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,1.68471475667626,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.65085738669511,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,3.48346796635138,0.684466602170562,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91436230634034,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.658501712451753,0,1.70899253099772,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,1.20303882181971,2.85451065701279,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,1.4875642382488,1.92190067365106,0,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,1.68471475667626,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.65085738669511,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,3.48346796635138,0.684466602170562,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:153587142..153587155,- | |short_description=p@chr1:153587142..153587155,- | ||
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Latest revision as of 21:47, 27 July 2015
Short description: | p@chr1:153587142..153587155, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153587142..153587155, - |
Coexpression cluster: | C3872_tongue_Prostate_Bronchial_Sebocyte_Keratinocyte_Corneal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.30e-22 | 2 |
endo-epithelial cell | 5.80e-15 | 42 |
epithelial cell of prostate | 7.02e-15 | 3 |
respiratory epithelial cell | 4.64e-13 | 13 |
general ecto-epithelial cell | 1.88e-12 | 14 |
epithelial cell of esophagus | 5.05e-12 | 1 |
transitional epithelial cell | 2.13e-11 | 4 |
urothelial cell | 2.13e-11 | 4 |
endodermal cell | 1.38e-10 | 58 |
epithelial cell | 2.75e-08 | 253 |
sebum secreting cell | 9.44e-07 | 2 |
epithelial cell of sweat gland | 9.44e-07 | 2 |
epithelial cell of skin gland | 9.44e-07 | 2 |
acinar cell of sebaceous gland | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cornea | 1.13e-11 | 4 |
eye surface | 1.13e-11 | 4 |
optic eminence | 1.13e-11 | 4 |
corneal primordium | 1.13e-11 | 4 |
urothelium | 2.68e-09 | 5 |
transitional epithelium | 6.84e-08 | 6 |
surface structure | 1.86e-07 | 99 |
skin gland | 9.44e-07 | 2 |
epidermis gland | 9.44e-07 | 2 |
gland of integumental system | 9.44e-07 | 2 |
sebaceous gland | 9.44e-07 | 2 |
skin sebaceous gland | 9.44e-07 | 2 |
sweat gland | 9.44e-07 | 2 |
sweat gland placode | 9.44e-07 | 2 |
sebaceous gland placode | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.63e-11 | 1 |
keratoacanthoma | 1.63e-11 | 1 |