FFCP PHASE1:Hg19::chr1:53392926..53392987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6342 | |EntrezGene=6342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10606 | |HGNC=10606 | ||
|TSSclassifier=strong | |||
|UniProt=A6NM69,C9JC79,E9PLD1,B4DHP6,Q6NXF4,P22307 | |UniProt=A6NM69,C9JC79,E9PLD1,B4DHP6,Q6NXF4,P22307 | ||
|association_with_transcript=0bp_to_ENST00000371509,ENST00000407246,ENST00000478631,ENST00000528311,uc001cuq.1,uc001cur.1,uc001cus.1,uc009vzi.1,uc010ono.1,uc010onp.1_5end | |association_with_transcript=0bp_to_ENST00000371509,ENST00000407246,ENST00000478631,ENST00000528311,uc001cuq.1,uc001cur.1,uc001cus.1,uc009vzi.1,uc010ono.1,uc010onp.1_5end | ||
|cluster_id=chr1:53392926..53392987,+ | |||
|description=CAGE_peak_2_at_SCP2_5end | |description=CAGE_peak_2_at_SCP2_5end | ||
|id=chr1:53392926..53392987,+ | |id=chr1:53392926..53392987,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-31!115;UBERON:0001049!8.90e-18!57;UBERON:0005068!8.90e-18!57;UBERON:0006241!8.90e-18!57;UBERON:0007135!8.90e-18!57;UBERON:0002616!4.49e-16!59;UBERON:0000062!2.52e-15!511;UBERON:0003080!2.83e-15!42;UBERON:0002780!3.05e-15!41;UBERON:0001890!3.05e-15!41;UBERON:0006240!3.05e-15!41;UBERON:0000955!2.74e-14!69;UBERON:0006238!2.74e-14!69;UBERON:0003075!1.96e-13!86;UBERON:0007284!1.96e-13!86;UBERON:0002346!8.96e-13!90;UBERON:0005743!1.67e-12!86;UBERON:0001893!2.17e-12!34;UBERON:0002020!2.64e-12!34;UBERON:0003528!2.64e-12!34;UBERON:0001017!3.05e-12!82;UBERON:0001869!6.04e-12!32;UBERON:0002791!6.63e-12!33;UBERON:0000073!5.57e-11!94;UBERON:0001016!5.57e-11!94;UBERON:0000033!1.24e-10!123;UBERON:0002619!3.44e-10!22;UBERON:0000153!7.16e-10!129;UBERON:0007811!7.16e-10!129;UBERON:0003056!1.18e-09!61;UBERON:0001950!1.53e-09!20;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0000475!1.63e-08!365;UBERON:0000481!1.05e-07!347;UBERON:0004121!1.22e-07!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173;UBERON:0000467!5.84e-07!625 | |ontology_enrichment_uberon=UBERON:0007023!2.34e-31!115;UBERON:0001049!8.90e-18!57;UBERON:0005068!8.90e-18!57;UBERON:0006241!8.90e-18!57;UBERON:0007135!8.90e-18!57;UBERON:0002616!4.49e-16!59;UBERON:0000062!2.52e-15!511;UBERON:0003080!2.83e-15!42;UBERON:0002780!3.05e-15!41;UBERON:0001890!3.05e-15!41;UBERON:0006240!3.05e-15!41;UBERON:0000955!2.74e-14!69;UBERON:0006238!2.74e-14!69;UBERON:0003075!1.96e-13!86;UBERON:0007284!1.96e-13!86;UBERON:0002346!8.96e-13!90;UBERON:0005743!1.67e-12!86;UBERON:0001893!2.17e-12!34;UBERON:0002020!2.64e-12!34;UBERON:0003528!2.64e-12!34;UBERON:0001017!3.05e-12!82;UBERON:0001869!6.04e-12!32;UBERON:0002791!6.63e-12!33;UBERON:0000073!5.57e-11!94;UBERON:0001016!5.57e-11!94;UBERON:0000033!1.24e-10!123;UBERON:0002619!3.44e-10!22;UBERON:0000153!7.16e-10!129;UBERON:0007811!7.16e-10!129;UBERON:0003056!1.18e-09!61;UBERON:0001950!1.53e-09!20;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0000475!1.63e-08!365;UBERON:0000481!1.05e-07!347;UBERON:0004121!1.22e-07!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173;UBERON:0000467!5.84e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.81e-11;41!UBERON:0001890;4.81e-11;41!UBERON:0001869;7.88e-11;32!UBERON:0001893;1.13e-10;34!UBERON:0002791;1.22e-10;32!UBERON:0003528;1.35e-10;34!UBERON:0002020;1.35e-10;34!UBERON:0002619;3.58e-10;22!UBERON:0000073;1.07e-09;53!UBERON:0002616;1.07e-09;53!UBERON:0001950;1.54e-09;20!UBERON:0000956;1.24e-08;25!UBERON:0000203;1.24e-08;25!UBERON:0007023;2.12e-08;114!UBERON:0000955;2.93e-07;68!UBERON:0001017;3.72e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.81e-11;41!UBERON:0001890;4.81e-11;41!UBERON:0001869;7.88e-11;32!UBERON:0001893;1.13e-10;34!UBERON:0002791;1.22e-10;32!UBERON:0003528;1.35e-10;34!UBERON:0002020;1.35e-10;34!UBERON:0002619;3.58e-10;22!UBERON:0000073;1.07e-09;53!UBERON:0002616;1.07e-09;53!UBERON:0001950;1.54e-09;20!UBERON:0000956;1.24e-08;25!UBERON:0000203;1.24e-08;25!UBERON:0007023;2.12e-08;114!UBERON:0000955;2.93e-07;68!UBERON:0001017;3.72e-07;75 | ||
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| ||
|short_description=p2@SCP2 | |short_description=p2@SCP2 | ||
}} | }} |
Latest revision as of 13:22, 18 September 2015
Short description: | p2@SCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371509, ENST00000407246, ENST00000478631, ENST00000528311, uc001cuq.1, uc001cur.1, uc001cus.1, uc009vzi.1, uc010ono.1, uc010onp.1_5end |
EntrezGene: | SCP2 |
HGNC: | 10606 |
UniProt: | A6NM69C9JC79E9PLD1B4DHP6Q6NXF4P22307 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data