FFCP PHASE1:Hg19::chr15:34729970..34730066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23015 | |EntrezGene=23015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31972 | |HGNC=31972 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-303bp_to_NR_027409_5end | |association_with_transcript=-303bp_to_NR_027409_5end | ||
|cluster_id=chr15:34729970..34730066,- | |||
|coexpression_cluster_id=C237 | |coexpression_cluster_id=C237 | ||
|description=CAGE_peak_1_at_GOLGA8A_5end | |description=CAGE_peak_1_at_GOLGA8A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-15!115;UBERON:0001049!1.96e-10!57;UBERON:0005068!1.96e-10!57;UBERON:0006241!1.96e-10!57;UBERON:0007135!1.96e-10!57;UBERON:0000073!2.06e-09!94;UBERON:0001016!2.06e-09!94;UBERON:0002780!3.65e-09!41;UBERON:0001890!3.65e-09!41;UBERON:0006240!3.65e-09!41;UBERON:0003080!6.94e-09!42;UBERON:0002346!2.96e-08!90;UBERON:0002616!3.70e-08!59;UBERON:0002020!6.19e-08!34;UBERON:0003528!6.19e-08!34;UBERON:0001893!9.70e-08!34;UBERON:0002791!1.22e-07!33;UBERON:0005743!1.59e-07!86;UBERON:0001017!1.82e-07!82;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0003075!2.82e-07!86;UBERON:0007284!2.82e-07!86;UBERON:0001869!4.29e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.96e-15!115;UBERON:0001049!1.96e-10!57;UBERON:0005068!1.96e-10!57;UBERON:0006241!1.96e-10!57;UBERON:0007135!1.96e-10!57;UBERON:0000073!2.06e-09!94;UBERON:0001016!2.06e-09!94;UBERON:0002780!3.65e-09!41;UBERON:0001890!3.65e-09!41;UBERON:0006240!3.65e-09!41;UBERON:0003080!6.94e-09!42;UBERON:0002346!2.96e-08!90;UBERON:0002616!3.70e-08!59;UBERON:0002020!6.19e-08!34;UBERON:0003528!6.19e-08!34;UBERON:0001893!9.70e-08!34;UBERON:0002791!1.22e-07!33;UBERON:0005743!1.59e-07!86;UBERON:0001017!1.82e-07!82;UBERON:0000955!2.22e-07!69;UBERON:0006238!2.22e-07!69;UBERON:0003075!2.82e-07!86;UBERON:0007284!2.82e-07!86;UBERON:0001869!4.29e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.27e-07;41!UBERON:0001890;5.27e-07;41!UBERON:0003528;8.18e-07;34!UBERON:0002020;8.18e-07;34!UBERON:0000073;8.34e-07;53!UBERON:0002616;8.34e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002780;5.27e-07;41!UBERON:0001890;5.27e-07;41!UBERON:0003528;8.18e-07;34!UBERON:0002020;8.18e-07;34!UBERON:0000073;8.34e-07;53!UBERON:0002616;8.34e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.93e-15,114;UBERON:0001049,1.08e-10,56;UBERON:0005068,1.08e-10,56;UBERON:0006241,1.08e-10,56;UBERON:0007135,1.08e-10,56;UBERON:0000073,2.71e-10,53;UBERON:0002616,2.71e-10,53;UBERON:0001016,1.57e-09,89;UBERON:0002780,3.59e-09,41;UBERON:0001890,3.59e-09,41;UBERON:0003080,3.59e-09,41;UBERON:0006240,3.59e-09,41;UBERON:0002346,2.83e-08,86;UBERON:0003528,6.12e-08,34;UBERON:0002020,6.12e-08,34;UBERON:0001893,9.58e-08,34;UBERON:0001017,1.30e-07,81;UBERON:0000955,1.53e-07,68;UBERON:0006238,1.53e-07,68;UBERON:0002791,2.21e-07,32;UBERON:0003075,2.79e-07,82;UBERON:0007284,2.79e-07,82;UBERON:0001869,4.24e-07,32 | |||
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| ||
|short_description=p1@GOLGA8A | |short_description=p1@GOLGA8A | ||
}} | }} |
Latest revision as of 06:54, 17 September 2015
Short description: | p1@GOLGA8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GOLGA8A_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -303bp_to_NR_027409_5end |
EntrezGene: | GOLGA8A |
HGNC: | 31972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.93e-15 | 114 |
neural tube | 1.08e-10 | 56 |
neural rod | 1.08e-10 | 56 |
future spinal cord | 1.08e-10 | 56 |
neural keel | 1.08e-10 | 56 |
regional part of nervous system | 2.71e-10 | 53 |
regional part of brain | 2.71e-10 | 53 |
nervous system | 1.57e-09 | 89 |
regional part of forebrain | 3.59e-09 | 41 |
forebrain | 3.59e-09 | 41 |
anterior neural tube | 3.59e-09 | 41 |
future forebrain | 3.59e-09 | 41 |
neurectoderm | 2.83e-08 | 86 |
brain grey matter | 6.12e-08 | 34 |
gray matter | 6.12e-08 | 34 |
telencephalon | 9.58e-08 | 34 |
central nervous system | 1.30e-07 | 81 |
brain | 1.53e-07 | 68 |
future brain | 1.53e-07 | 68 |
regional part of telencephalon | 2.21e-07 | 32 |
neural plate | 2.79e-07 | 82 |
presumptive neural plate | 2.79e-07 | 82 |
cerebral hemisphere | 4.24e-07 | 32 |