FFCP PHASE1:Hg19::chr20:35177642..35177704,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:35177642..35177704,+
|short_description=p@chr20:35177642..35177704,+
|description=CAGE_peak_at_chr20:35177642..35177704,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35177642..35177704,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177642..35177704,+ | |||
|id=chr20:35177642..35177704,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.13e-22!180;CL:0000192!6.36e-13!42;CL:0000514!6.36e-13!42;CL:0000057!9.58e-13!75;CL:0000183!1.56e-12!59;CL:0000680!3.94e-12!57;CL:0000056!3.94e-12!57;CL:0000355!3.94e-12!57;CL:0000187!1.28e-11!54;CL:0000359!1.43e-10!32;CL:0000393!1.51e-10!60;CL:0000211!1.51e-10!60;CL:0000136!4.08e-09!15;CL:0000222!3.55e-08!119;CL:0002334!9.17e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-10;32!CL:0000192;5.30e-10;43!CL:0000136;4.59e-09;13!CL:0002334;2.42e-07;12!CL:0000134;2.47e-07;55!CL:0000187;9.96e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.65e-14,43;CL:0000514,8.65e-14,43;CL:0000680,6.95e-13,58;CL:0000056,6.95e-13,58;CL:0000355,6.95e-13,58;CL:0000187,2.59e-12,55;CL:0000057,8.08e-12,76;CL:0000393,3.78e-11,61;CL:0000211,3.78e-11,61;CL:0000359,3.97e-11,32;CL:0000136,5.31e-10,15;CL:0002334,2.24e-07,12;CL:0000222,2.27e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.30e-10;43!CL:0000355;9.58e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.79e-16!143;UBERON:0000914!5.37e-15!83;UBERON:0002329!5.37e-15!83;UBERON:0003077!5.37e-15!83;UBERON:0003059!5.37e-15!83;UBERON:0007282!5.37e-15!83;UBERON:0009618!5.37e-15!83;UBERON:0007285!5.37e-15!83;UBERON:0002385!9.68e-14!63;UBERON:0001015!9.68e-14!63;UBERON:0000383!9.68e-14!63;UBERON:0004290!1.10e-13!70;UBERON:0000486!6.43e-13!82;UBERON:0001134!1.12e-12!61;UBERON:0002036!1.12e-12!61;UBERON:0003082!1.12e-12!61;UBERON:0002100!1.20e-11!216;UBERON:0000481!1.65e-11!347;UBERON:0004872!7.31e-11!84;UBERON:0003104!7.42e-11!238;UBERON:0009142!7.42e-11!238;UBERON:0000468!2.19e-10!659;UBERON:0001009!3.03e-10!113;UBERON:0004535!1.96e-09!110;UBERON:0002049!3.77e-09!79;UBERON:0007798!3.77e-09!79;UBERON:0000475!9.52e-09!365;UBERON:0003914!1.08e-08!118;UBERON:0000490!3.54e-08!138;UBERON:0001981!3.65e-08!60;UBERON:0007500!3.65e-08!60;UBERON:0004537!3.65e-08!60;UBERON:0006965!3.65e-08!60;UBERON:0001637!4.53e-08!42;UBERON:0003509!4.53e-08!42;UBERON:0004572!4.53e-08!42;UBERON:0000926!8.22e-08!448;UBERON:0004120!8.22e-08!448;UBERON:0006603!8.22e-08!448;UBERON:0000055!1.78e-07!69;UBERON:0007100!3.82e-07!27;UBERON:0000467!4.78e-07!625;UBERON:0001013!4.87e-07!14;UBERON:0000480!7.09e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.33e-07;14!UBERON:0007100;1.57e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.94e-17,160;UBERON:0009142,5.94e-17,160;UBERON:0005256,3.82e-16,122;UBERON:0002385,1.14e-14,64;UBERON:0001015,1.14e-14,64;UBERON:0000383,1.14e-14,64;UBERON:0007503,1.08e-13,78;UBERON:0007524,1.14e-13,73;UBERON:0001134,1.68e-13,62;UBERON:0002036,1.68e-13,62;UBERON:0003082,1.68e-13,62;UBERON:0002329,2.87e-13,71;UBERON:0003059,2.87e-13,71;UBERON:0007282,2.87e-13,71;UBERON:0004290,2.87e-13,71;UBERON:0009618,2.87e-13,71;UBERON:0003077,3.25e-13,72;UBERON:0007285,3.25e-13,72;UBERON:0000486,3.84e-11,83;UBERON:0000926,1.27e-10,315;UBERON:0004120,1.27e-10,315;UBERON:0006603,1.27e-10,315;UBERON:0002100,1.66e-10,199;UBERON:0004872,1.77e-10,83;UBERON:0001009,9.60e-10,112;UBERON:0004535,6.77e-09,109;UBERON:0002049,2.58e-08,78;UBERON:0007798,2.58e-08,78;UBERON:0001637,4.21e-08,42;UBERON:0003509,4.21e-08,42;UBERON:0004572,4.21e-08,42;UBERON:0003914,5.87e-08,117;UBERON:0007100,6.01e-08,27;UBERON:0000490,1.04e-07,148;UBERON:0001013,1.10e-07,14;UBERON:0007500,1.85e-07,59;UBERON:0001981,1.85e-07,59;UBERON:0004537,1.85e-07,59;UBERON:0006965,1.85e-07,59;UBERON:0000948,7.79e-07,24;UBERON:0005498,7.79e-07,24;UBERON:0004140,7.79e-07,24;UBERON:0009881,7.79e-07,24;UBERON:0004141,7.79e-07,24;UBERON:0003084,7.79e-07,24;UBERON:0007005,7.79e-07,24;UBERON:0004139,7.79e-07,24;UBERON:0004291,7.79e-07,24;UBERON:0004573,8.90e-07,33;UBERON:0004571,8.90e-07,33 | |||
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|phase1_expression=81.7552706717505,36.6111895853581,60.8923025694595,64.0469109460035,106.376740473694,63.6807122593269,220.37089400643,23.3736353167927,10.9697963843932,6.88055022204225,18.8406315352555,0.436882744260345,1.05506791291381,1.36142988256051,3.31397375727916,26.2206807116192,24.1077811209591,23.3699228923959,17.0776479576677,0.492484232307152,1.42800483870977,2.82109249330279,1.71741592278634,0.273748850145768,2.38531015230125,0,0,0,1.57345710739562,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,3.45228916977532,10.1202962667679,18.048164782892,11.0083354410226,0.795285947051099,3.40644409211845,1.79616152611729,8.86917589850256,3.86473057049755,11.9845854080407,0,0,0.97364218096405,1.39303789839414,2.12732736830184,0,0,0,0.198762407366705,0,0.347140501607594,0,1.67799774483962,0.550236083880135,1.04497483268405,0.516833518338658,0.35576626268671,0,1.20848795132744,0,3.90499292077071,0,3.24056779152704,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,22.8607097779847,15.3222919114142,4.10468460520978,4.30254931123221,8.15737279056221,30.8372680078269,14.9448594021587,41.6868156825,1.8672662123986,2.55950276932407,1.63461903113459,2.11900398702904,2.30470369792,0.468642863667593,10.3012825354006,0.570471821544449,2.24173020827702,0.587172493218824,0.647491777472526,0.98315564691574,1.02077085627447,0.982674538494144,1.85986406116378,53.4601285776924,60.0858638146893,2.73048408581408,11.4978902690598,0.673344455816265,0.875829639103749,1.10825646193673,20.6319481813994,43.8277547992598,39.9633236691547,6.12533789064114,3.22901344239952,13.6676728843883,11.4443226626163,2.40072876867522,9.89304280689013,6.95629458123199,18.9839193458222,1.18143432568886,11.5950036141826,5.80597680761463,15.1882332759794,6.7891343863901,8.52023022039874,19.4451549579346,10.0040749463188,0.193260853163297,0.818238361772504,0.573609190778008,5.00092195131341,2.65059536642971,2.67246068599892,2.28054321033815,3.5324919122588,2.91981887260664,23.4674298494724,28.9458422186798,15.1948413487729,12.5379340568634,9.38443326170461,1.30137480043828,0.842923450390509,1.44606617930089,1.32352767278873,0.871517776369625,1.66089433377768,2.42696354688296,1.17732879075208,2.30848294167834,3.69077727312324,9.81692416624121,6.5851841813024,16.1709582524096,0,0,4.13552934676983,0,0.614942192715568,2.40194934417936,0.329250856225877,0,0,0.277765335475589,0.325808305310325,0,2.88662684050547,0.463721619900307,4.10930429825376,1.58803092537181,2.77791307545966,1.33177906564219,0,0,0,1.17002132569619,0.148631162288728,0.93733833986777,2.51973192298289,0.708875486211932,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0.381988425558278,0,3.4214489204541,0.616964956219941,2.40274446275134,0.285826432630578,1.00917975910825,1.74384027533312,0.66004457238855,12.0222695654733,57.2250313363012,5.071816515336,61.69764304769,34.3224541807508,1.02882949704857,1.41849132023278,1.8649552531127,6.0050757336422,2.71310802695722,5.76268235746538,2.93162565864362,6.39705507736582,1.58390374586686,17.7849232465156,20.0452695478068,18.2950573863164,0,0,0,27.0776086705488,39.0530581835987,0,7.96297186671686,2.87666851570537,4.29746311775749,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0.414415513436035,2.94459580125936,9.00306937907419,4.6115054028955,19.5492609838959,16.7723249469332,10.4083593922397,7.37990914454093,19.260550382574,111.429676987433,12.4167685551006,7.97070718242524,9.58719676416856,17.1160720502123,9.79005787313703,6.86286847621712,0.206768026122887,0.215714200818617,0,0,6.65741758041988,0.604780586659361,36.4718477493602,6.75232682467475,31.4339305765042,25.2434124033731,44.0068234197365,39.4092106801838,26.7152519600984,3.54682295746108,23.6157094666459,6.81655394914616,14.0198695879578,11.7372482244559,5.07609688284813,6.21570057940183,0,9.52959919766236,12.0180170884433,46.680291725555,0.902399225814824,0.616122696835318,1.56869953835371,0,0.105551628892876,0,0.680374821106063,1.51141141271498,12.3381802152231,3.52230368807009,16.5557625372102,0,0,1.11937377361089,0,0,0.512900250232778,4.92021968549559,6.18218949862176,9.78889610653362,0.54941678891006,0.990113999047056,0.574265537996172,0,49.8120182516895,7.83032818166188,1.54048617114644,1.5350367472613,1.37836572484531,2.14840489736547,2.17525040871343,0.93749290157711,4.71869788927708,0.991709492165869,1.34533047155574,0,0.30347334256665,28.8204240564317,8.18512101759664,3.485186350803,0.924100740528266,6.38767236380426,5.21959795245044,14.6406133092097,6.01124524316363,3.72158369359667,10.440521015718,15.0597853199822,8.70052490458535,2.56763392820352,6.0458617105928,16.4839214441838,7.55464321849922,9.33425901102586,4.47687128913608,5.86329196562617,9.5106192703805,7.58265221230166,4.8763373908959,5.84912375115083,2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| ||
|short_description=p@chr20:35177642..35177704,+ | |||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177642..35177704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177642..35177704, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.65e-14 | 43 |
smooth muscle myoblast | 8.65e-14 | 43 |
muscle precursor cell | 6.95e-13 | 58 |
myoblast | 6.95e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.95e-13 | 58 |
muscle cell | 2.59e-12 | 55 |
fibroblast | 8.08e-12 | 76 |
electrically responsive cell | 3.78e-11 | 61 |
electrically active cell | 3.78e-11 | 61 |
vascular associated smooth muscle cell | 3.97e-11 | 32 |
fat cell | 5.31e-10 | 15 |
preadipocyte | 2.24e-07 | 12 |
mesodermal cell | 2.27e-07 | 121 |