FFCP PHASE1:Hg19::chr20:34680623..34680655,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:34680623..34680655,+
|short_description=p2@EPB41L1
|description=CAGE_peak_2_at_EPB41L1_5end
|association_with_transcript=0bp_to_ENST00000373950,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2036 | |EntrezGene=2036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3378 | |HGNC=3378 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VXN1,B7Z653,Q4VXN5 | |UniProt=Q4VXN1,B7Z653,Q4VXN5 | ||
|association_with_transcript=0bp_to_ENST00000373950,ENST00000373951,ENST00000397307,ENST00000397315,ENST00000452261,uc002xev.2,uc002xew.2,uc002xex.2,uc010zvo.1_5end | |||
|cluster_id=chr20:34680623..34680655,+ | |||
|coexpression_cluster_id=C4029 | |||
|description=CAGE_peak_2_at_EPB41L1_5end | |||
|id=chr20:34680623..34680655,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.09e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.07e-07;82 | |||
|ontology_enrichment_disease=DOID:305!3.40e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.08e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.60e-20!86;UBERON:0001049!3.13e-20!57;UBERON:0005068!3.13e-20!57;UBERON:0006241!3.13e-20!57;UBERON:0007135!3.13e-20!57;UBERON:0001017!9.69e-20!82;UBERON:0000955!7.84e-19!69;UBERON:0006238!7.84e-19!69;UBERON:0007023!8.33e-19!115;UBERON:0002616!1.94e-18!59;UBERON:0000073!7.30e-17!94;UBERON:0001016!7.30e-17!94;UBERON:0003075!9.64e-17!86;UBERON:0007284!9.64e-17!86;UBERON:0000477!1.22e-16!286;UBERON:0004111!7.49e-16!241;UBERON:0003080!3.08e-15!42;UBERON:0002346!4.47e-15!90;UBERON:0002780!5.09e-15!41;UBERON:0001890!5.09e-15!41;UBERON:0006240!5.09e-15!41;UBERON:0002020!5.42e-15!34;UBERON:0003528!5.42e-15!34;UBERON:0000033!6.26e-15!123;UBERON:0001893!1.84e-14!34;UBERON:0001869!2.79e-14!32;UBERON:0000153!3.86e-14!129;UBERON:0007811!3.86e-14!129;UBERON:0002791!5.05e-14!33;UBERON:0000064!8.76e-14!219;UBERON:0000025!1.14e-13!194;UBERON:0002619!2.80e-13!22;UBERON:0000062!6.33e-13!511;UBERON:0001950!1.96e-12!20;UBERON:0003056!2.46e-12!61;UBERON:0000468!1.18e-10!659;UBERON:0000956!1.48e-10!25;UBERON:0000203!1.48e-10!25;UBERON:0000467!2.01e-10!625;UBERON:0000480!2.37e-10!626;UBERON:0000481!4.74e-10!347;UBERON:0004121!1.43e-09!169;UBERON:0000924!7.91e-09!173;UBERON:0006601!7.91e-09!173;UBERON:0000475!8.64e-09!365;UBERON:0000922!1.06e-08!612;UBERON:0000483!1.28e-08!309;UBERON:0002050!1.61e-08!605;UBERON:0005423!1.61e-08!605;UBERON:0000119!1.67e-08!312;UBERON:0000923!2.66e-08!604;UBERON:0005291!2.66e-08!604;UBERON:0006598!2.66e-08!604;UBERON:0002532!2.66e-08!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.05e-14;22!UBERON:0001869;3.52e-14;32!UBERON:0003528;3.54e-14;34!UBERON:0002020;3.54e-14;34!UBERON:0002791;7.06e-14;32!UBERON:0001950;9.51e-14;20!UBERON:0001893;1.31e-13;34!UBERON:0002780;1.95e-12;41!UBERON:0001890;1.95e-12;41!UBERON:0000073;1.00e-11;53!UBERON:0002616;1.00e-11;53!UBERON:0000956;1.46e-11;25!UBERON:0000203;1.46e-11;25!UBERON:0001017;1.59e-10;75!UBERON:0000955;1.17e-09;68!UBERON:0001016;2.50e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-22,81;UBERON:0001049,4.02e-22,56;UBERON:0005068,4.02e-22,56;UBERON:0006241,4.02e-22,56;UBERON:0007135,4.02e-22,56;UBERON:0007023,8.56e-21,114;UBERON:0000955,1.11e-20,68;UBERON:0006238,1.11e-20,68;UBERON:0000073,1.29e-20,53;UBERON:0002616,1.29e-20,53;UBERON:0001016,9.51e-19,89;UBERON:0011216,2.81e-17,223;UBERON:0002780,1.54e-16,41;UBERON:0001890,1.54e-16,41;UBERON:0003080,1.54e-16,41;UBERON:0006240,1.54e-16,41;UBERON:0003528,1.68e-16,34;UBERON:0002020,1.68e-16,34;UBERON:0003075,2.24e-16,82;UBERON:0007284,2.24e-16,82;UBERON:0001893,6.59e-16,34;UBERON:0001869,1.05e-15,32;UBERON:0002791,2.96e-15,32;UBERON:0002346,8.50e-15,86;UBERON:0002619,1.12e-14,22;UBERON:0004111,1.21e-14,240;UBERON:0001950,9.89e-14,20;UBERON:0000025,9.07e-13,192;UBERON:0003056,1.21e-11,61;UBERON:0000956,1.53e-11,25;UBERON:0000203,1.53e-11,25;UBERON:0010314,5.55e-10,132;UBERON:0004121,2.43e-09,171;UBERON:0000924,2.43e-09,171;UBERON:0006601,2.43e-09,171;UBERON:0010371,7.98e-09,104;UBERON:0005423,2.35e-07,581;UBERON:0000922,3.85e-07,592;UBERON:0003076,8.01e-07,15;UBERON:0003057,8.01e-07,15 | |||
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| ||
|short_description=p2@EPB41L1 | |||
}} | }} |
Latest revision as of 21:49, 15 September 2015
Short description: | p2@EPB41L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPB41L1_5end |
Coexpression cluster: | C4029_Mast_tubular_mature_duodenum_brain_temporal_mesodermal |
Association with transcript: | 0bp_to_ENST00000373950, ENST00000373951, ENST00000397307, ENST00000397315, ENST00000452261, uc002xev.2, uc002xew.2, uc002xex.2, uc010zvo.1_5end |
EntrezGene: | EPB41L1 |
HGNC: | 3378 |
UniProt: | Q4VXN1B7Z653Q4VXN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.08e-08 | 106 |