FFCP PHASE1:Hg19::chr5:121647859..121647876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9627 | |EntrezGene=9627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11139 | |HGNC=11139 | ||
|TSSclassifier=strong | |||
|UniProt=D6REC1 | |UniProt=D6REC1 | ||
|association_with_transcript=-1bp_to_ENST00000514497_5end | |association_with_transcript=-1bp_to_ENST00000514497_5end | ||
|cluster_id=chr5:121647859..121647876,+ | |||
|coexpression_cluster_id=C4453 | |coexpression_cluster_id=C4453 | ||
|description=CAGE_peak_3_at_SNCAIP_5end | |description=CAGE_peak_3_at_SNCAIP_5end | ||
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|ontology_enrichment_celltype=CL:0002319!9.13e-09!25;CL:0000047!7.92e-08!8 | |ontology_enrichment_celltype=CL:0002319!9.13e-09!25;CL:0000047!7.92e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.19e-08;2 | |ontology_enrichment_celltype_v019=CL:0000047;4.19e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.33e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.55e-13;3!UBERON:0010122;1.96e-08;2 | |ontology_enrichment_development_v019=UBERON:0006215;8.55e-13;3!UBERON:0010122;1.96e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-26!82;UBERON:0007023!3.95e-25!115;UBERON:0005743!4.06e-25!86;UBERON:0000073!8.19e-24!94;UBERON:0001016!8.19e-24!94;UBERON:0001049!1.82e-21!57;UBERON:0005068!1.82e-21!57;UBERON:0006241!1.82e-21!57;UBERON:0007135!1.82e-21!57;UBERON:0000955!3.79e-18!69;UBERON:0006238!3.79e-18!69;UBERON:0003075!5.68e-17!86;UBERON:0007284!5.68e-17!86;UBERON:0004121!8.83e-17!169;UBERON:0002616!1.12e-16!59;UBERON:0000924!2.76e-16!173;UBERON:0006601!2.76e-16!173;UBERON:0002346!4.53e-16!90;UBERON:0003080!3.04e-15!42;UBERON:0002780!1.32e-14!41;UBERON:0001890!1.32e-14!41;UBERON:0006240!1.32e-14!41;UBERON:0001869!1.51e-14!32;UBERON:0001893!2.00e-14!34;UBERON:0002020!3.10e-14!34;UBERON:0003528!3.10e-14!34;UBERON:0002791!7.30e-14!33;UBERON:0000153!5.18e-13!129;UBERON:0007811!5.18e-13!129;UBERON:0000033!1.34e-12!123;UBERON:0003056!3.99e-11!61;UBERON:0000477!2.13e-10!286;UBERON:0004111!2.66e-10!241;UBERON:0000956!3.02e-10!25;UBERON:0000203!3.02e-10!25;UBERON:0000468!3.70e-09!659;UBERON:0000922!1.57e-08!612;UBERON:0002619!2.51e-08!22;UBERON:0000025!9.65e-08!194;UBERON:0000467!1.21e-07!625;UBERON:0000480!1.51e-07!626;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15;UBERON:0000064!3.04e-07!219;UBERON:0000923!3.55e-07!604;UBERON:0005291!3.55e-07!604;UBERON:0006598!3.55e-07!604;UBERON:0002532!3.55e-07!604;UBERON:0001950!3.55e-07!20 | |ontology_enrichment_uberon=UBERON:0001017!1.63e-26!82;UBERON:0007023!3.95e-25!115;UBERON:0005743!4.06e-25!86;UBERON:0000073!8.19e-24!94;UBERON:0001016!8.19e-24!94;UBERON:0001049!1.82e-21!57;UBERON:0005068!1.82e-21!57;UBERON:0006241!1.82e-21!57;UBERON:0007135!1.82e-21!57;UBERON:0000955!3.79e-18!69;UBERON:0006238!3.79e-18!69;UBERON:0003075!5.68e-17!86;UBERON:0007284!5.68e-17!86;UBERON:0004121!8.83e-17!169;UBERON:0002616!1.12e-16!59;UBERON:0000924!2.76e-16!173;UBERON:0006601!2.76e-16!173;UBERON:0002346!4.53e-16!90;UBERON:0003080!3.04e-15!42;UBERON:0002780!1.32e-14!41;UBERON:0001890!1.32e-14!41;UBERON:0006240!1.32e-14!41;UBERON:0001869!1.51e-14!32;UBERON:0001893!2.00e-14!34;UBERON:0002020!3.10e-14!34;UBERON:0003528!3.10e-14!34;UBERON:0002791!7.30e-14!33;UBERON:0000153!5.18e-13!129;UBERON:0007811!5.18e-13!129;UBERON:0000033!1.34e-12!123;UBERON:0003056!3.99e-11!61;UBERON:0000477!2.13e-10!286;UBERON:0004111!2.66e-10!241;UBERON:0000956!3.02e-10!25;UBERON:0000203!3.02e-10!25;UBERON:0000468!3.70e-09!659;UBERON:0000922!1.57e-08!612;UBERON:0002619!2.51e-08!22;UBERON:0000025!9.65e-08!194;UBERON:0000467!1.21e-07!625;UBERON:0000480!1.51e-07!626;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15;UBERON:0000064!3.04e-07!219;UBERON:0000923!3.55e-07!604;UBERON:0005291!3.55e-07!604;UBERON:0006598!3.55e-07!604;UBERON:0002532!3.55e-07!604;UBERON:0001950!3.55e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.96e-08;2!UBERON:0002680;4.18e-07;9!UBERON:0001895;4.18e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001873;1.96e-08;2!UBERON:0002680;4.18e-07;9!UBERON:0001895;4.18e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.38e-10,81;UBERON:0001016,3.87e-09,89;UBERON:0001873,1.55e-08,2;UBERON:0010122,1.55e-08,2;UBERON:0002680,4.58e-07,9;UBERON:0001895,4.58e-07,9;UBERON:0010092,4.58e-07,9;UBERON:0011216,6.72e-07,223 | |||
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| ||
|short_description=p3@SNCAIP | |short_description=p3@SNCAIP | ||
}} | }} |
Latest revision as of 23:36, 19 September 2015
Short description: | p3@SNCAIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNCAIP_5end |
Coexpression cluster: | C4453_occipital_Endothelial_parietal_temporal_uterus_sacrococcigeal_pharyngeal |
Association with transcript: | -1bp_to_ENST00000514497_5end |
EntrezGene: | SNCAIP |
HGNC: | 11139 |
UniProt: | D6REC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.33e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.38e-10 | 81 |
nervous system | 3.87e-09 | 89 |
caudate nucleus | 1.55e-08 | 2 |
future caudate nucleus | 1.55e-08 | 2 |
regional part of metencephalon | 4.58e-07 | 9 |
metencephalon | 4.58e-07 | 9 |
future metencephalon | 4.58e-07 | 9 |
organ system subdivision | 6.72e-07 | 223 |