FFCP PHASE1:Hg19::chr8:69834272..69834299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:69834272..69834299,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr8:69834272..69834299,- | |description=CAGE_peak_at_chr8:69834272..69834299,- | ||
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|ontology_enrichment_celltype=CL:0002589!1.18e-14!2;CL:0000057!3.07e-10!75;CL:0002615!1.21e-09!3;CL:0002579!2.41e-09!3;CL:0002334!1.37e-08!12;CL:0000055!5.27e-08!180;CL:0000342!8.51e-08!1;CL:0002565!8.51e-08!1;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002620!4.75e-07!23 | |ontology_enrichment_celltype=CL:0002589!1.18e-14!2;CL:0000057!3.07e-10!75;CL:0002615!1.21e-09!3;CL:0002579!2.41e-09!3;CL:0002334!1.37e-08!12;CL:0000055!5.27e-08!180;CL:0000342!8.51e-08!1;CL:0002565!8.51e-08!1;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002620!4.75e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002589;5.96e-34;2!CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0002548;2.59e-12;6 | |ontology_enrichment_celltype_v019=CL:0002589;5.96e-34;2!CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0002548;2.59e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.04e-34,2;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0002548,2.74e-12,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8552!9.10e-08!1;DOID:3112!9.72e-08!1 | |ontology_enrichment_disease=DOID:8552!9.10e-08!1;DOID:3112!9.72e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.76e-17!6;UBERON:0002358!2.76e-17!6;UBERON:0003684!2.76e-17!6;UBERON:0001178!2.76e-17!6;UBERON:0001529!1.18e-14!2;UBERON:0007204!1.18e-14!2;UBERON:0004573!4.44e-09!33;UBERON:0004571!4.44e-09!33;UBERON:0004457!1.01e-08!12;UBERON:0000042!1.01e-08!12;UBERON:0002506!8.51e-08!1;UBERON:0001769!8.51e-08!1;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4;UBERON:0001637!6.04e-07!42;UBERON:0003509!6.04e-07!42;UBERON:0004572!6.04e-07!42 | |ontology_enrichment_uberon=UBERON:0003688!2.76e-17!6;UBERON:0002358!2.76e-17!6;UBERON:0003684!2.76e-17!6;UBERON:0001178!2.76e-17!6;UBERON:0001529!1.18e-14!2;UBERON:0007204!1.18e-14!2;UBERON:0004573!4.44e-09!33;UBERON:0004571!4.44e-09!33;UBERON:0004457!1.01e-08!12;UBERON:0000042!1.01e-08!12;UBERON:0002506!8.51e-08!1;UBERON:0001769!8.51e-08!1;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4;UBERON:0001637!6.04e-07!42;UBERON:0003509!6.04e-07!42;UBERON:0004572!6.04e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;5.96e-34;2!UBERON:0007204;5.96e-34;2!UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0004573;2.18e-08;33!UBERON:0004571;2.18e-08;33!UBERON:0001637;4.38e-07;42!UBERON:0003509;4.38e-07;42!UBERON:0004572;4.38e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0001529;5.96e-34;2!UBERON:0007204;5.96e-34;2!UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0004573;2.18e-08;33!UBERON:0004571;2.18e-08;33!UBERON:0001637;4.38e-07;42!UBERON:0003509;4.38e-07;42!UBERON:0004572;4.38e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.04e-34,2;UBERON:0007204,5.04e-34,2;UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0004797,8.16e-11,7;UBERON:0004573,3.79e-09,33;UBERON:0004571,3.79e-09,33;UBERON:0004872,3.31e-08,83;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42 | |||
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|short_description=p@chr8:69834272..69834299,- | |short_description=p@chr8:69834272..69834299,- | ||
}} | }} |
Latest revision as of 19:39, 31 July 2015
Short description: | p@chr8:69834272..69834299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:69834272..69834299, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.04e-34 | 2 |
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
cardiac fibroblast | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.04e-34 | 2 |
brachiocephalic vasculature | 5.04e-34 | 2 |
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
blood vessel layer | 8.16e-11 | 7 |
systemic artery | 3.79e-09 | 33 |
systemic arterial system | 3.79e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
artery | 2.04e-07 | 42 |
arterial blood vessel | 2.04e-07 | 42 |
arterial system | 2.04e-07 | 42 |