FFCP PHASE1:Hg19::chr13:115027352..115027359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:115027352..115027359,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_at_chr13:115027352..115027359,+ | |description=CAGE_peak_at_chr13:115027352..115027359,+ | ||
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|ontology_enrichment_celltype=CL:0000236!4.18e-57!14;CL:0000945!1.60e-39!24;CL:0000826!1.60e-39!24;CL:0000838!2.91e-17!52;CL:0000542!6.68e-17!53;CL:0000051!6.68e-17!53;CL:0000819!7.98e-10!1 | |ontology_enrichment_celltype=CL:0000236!4.18e-57!14;CL:0000945!1.60e-39!24;CL:0000826!1.60e-39!24;CL:0000838!2.91e-17!52;CL:0000542!6.68e-17!53;CL:0000051!6.68e-17!53;CL:0000819!7.98e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.91e-92;13!CL:0000945;2.89e-50;24!CL:0000785;2.45e-26;1!CL:0000819;2.45e-26;1!CL:0000542;4.08e-22;53 | |ontology_enrichment_celltype_v019=CL:0000236;1.91e-92;13!CL:0000945;2.89e-50;24!CL:0000785;2.45e-26;1!CL:0000819;2.45e-26;1!CL:0000542;4.08e-22;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.51e-86,14;CL:0000945,2.50e-50,24;CL:0000826,2.50e-50,24;CL:0000819,2.16e-26,1;CL:0000838,2.30e-23,52;CL:0000542,6.29e-23,53;CL:0000051,6.29e-23,53;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0002087,1.65e-10,115;CL:0002031,4.51e-10,120;CL:0000817,1.01e-09,3;CL:0000738,6.88e-09,136;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.08e-22;53!CL:0000954;6.85e-14;2 | |ontology_enrichment_development_v019=CL:0000051;4.08e-22;53!CL:0000954;6.85e-14;2 | ||
|ontology_enrichment_disease=DOID:0060073!7.98e-10!1;DOID:8675!7.98e-10!1 | |ontology_enrichment_disease=DOID:0060073!7.98e-10!1;DOID:8675!7.98e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.45e-26;1!DOID:8675;2.45e-26;1 | |ontology_enrichment_disease_v019=DOID:0060073;2.45e-26;1!DOID:8675;2.45e-26;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.16e-26,1;DOID:8675,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.05e-16!2 | |ontology_enrichment_uberon=UBERON:0003127!1.05e-16!2 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr13:115027352..115027359,+ | |short_description=p@chr13:115027352..115027359,+ | ||
}} | }} |
Latest revision as of 14:54, 24 July 2015
Short description: | p@chr13:115027352..115027359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:115027352..115027359, + |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.51e-86 | 14 |
lymphocyte of B lineage | 2.50e-50 | 24 |
pro-B cell | 2.50e-50 | 24 |
B-1 B cell | 2.16e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.30e-23 | 52 |
lymphocyte | 6.29e-23 | 53 |
common lymphoid progenitor | 6.29e-23 | 53 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
nongranular leukocyte | 1.65e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
precursor B cell | 1.01e-09 | 3 |
leukocyte | 6.88e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.16e-26 | 1 |
lymphosarcoma | 2.16e-26 | 1 |