FFCP PHASE1:Hg19::chr16:80068152..80068165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:80068152..80068165,- | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr16:80068152..80068165,- | |description=CAGE_peak_at_chr16:80068152..80068165,- | ||
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|ontology_enrichment_celltype=CL:0002166!4.33e-33!3;CL:0002621!3.32e-32!3;CL:1000497!1.22e-27!18;CL:0002518!1.22e-27!18;CL:0000244!1.78e-24!4;CL:0000731!1.78e-24!4;CL:1000449!4.33e-23!16;CL:1000507!1.34e-21!12;CL:1000494!1.34e-21!12;CL:0002681!5.64e-20!13;CL:0002584!5.64e-20!13;CL:0000239!7.53e-15!3;CL:1000615!7.53e-15!3;CL:0002306!7.53e-15!3;CL:0000066!5.34e-11!254;CL:0002159!4.42e-08!13;CL:1000612!5.34e-07!7;CL:1000746!5.34e-07!7 | |ontology_enrichment_celltype=CL:0002166!4.33e-33!3;CL:0002621!3.32e-32!3;CL:1000497!1.22e-27!18;CL:0002518!1.22e-27!18;CL:0000244!1.78e-24!4;CL:0000731!1.78e-24!4;CL:1000449!4.33e-23!16;CL:1000507!1.34e-21!12;CL:1000494!1.34e-21!12;CL:0002681!5.64e-20!13;CL:0002584!5.64e-20!13;CL:0000239!7.53e-15!3;CL:1000615!7.53e-15!3;CL:0002306!7.53e-15!3;CL:0000066!5.34e-11!254;CL:0002159!4.42e-08!13;CL:1000612!5.34e-07!7;CL:1000746!5.34e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002166;7.77e-118;3!CL:0002159;3.76e-26;14!CL:0002621;1.40e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0002077;1.74e-09;34 | |ontology_enrichment_celltype_v019=CL:0002166;7.77e-118;3!CL:0002159;3.76e-26;14!CL:0002621;1.40e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0002077;1.74e-09;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.20e-118,3;CL:0002159,3.45e-26,14;CL:0002621,1.40e-14,3;CL:0002077,2.57e-11,34;CL:0000244,3.79e-11,4;CL:0000731,3.79e-11,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr16:80068152..80068165,- | |short_description=p@chr16:80068152..80068165,- | ||
}} | }} |
Latest revision as of 12:36, 25 July 2015
Short description: | p@chr16:80068152..80068165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:80068152..80068165, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.20e-118 | 3 |
general ecto-epithelial cell | 3.45e-26 | 14 |
gingival epithelial cell | 1.40e-14 | 3 |
ecto-epithelial cell | 2.57e-11 | 34 |
transitional epithelial cell | 3.79e-11 | 4 |
urothelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 7.73e-89 | 4 |
splanchnocranium | 7.73e-89 | 4 |
primary subdivision of cranial skeletal system | 2.52e-71 | 5 |
protuberance | 1.22e-59 | 6 |
pharyngeal arch | 1.22e-59 | 6 |
embryonic head | 1.22e-59 | 6 |
cranial skeletal system | 4.79e-33 | 11 |
axial skeletal system | 3.45e-26 | 14 |
subdivision of skeletal system | 4.85e-23 | 16 |
pharyngeal arch system | 1.37e-20 | 18 |
gingival epithelium | 1.40e-14 | 3 |
head | 5.06e-12 | 56 |
anterior region of body | 6.33e-11 | 62 |
craniocervical region | 6.33e-11 | 62 |
urothelium | 3.49e-09 | 5 |
transitional epithelium | 7.25e-08 | 6 |
surface structure | 4.54e-07 | 99 |