FFCP PHASE1:Hg19::chr2:43453083..43453099,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43453083..43453099,- | |||
|coexpression_cluster_id=C446 | |coexpression_cluster_id=C446 | ||
|description=CAGE_peak_at_chr2:43453083..43453099,- | |description=CAGE_peak_at_chr2:43453083..43453099,- | ||
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|ontology_enrichment_celltype=CL:0000738!1.34e-17!140;CL:0000988!1.29e-16!182;CL:0000037!2.52e-16!172;CL:0000566!2.52e-16!172;CL:0002032!3.42e-15!165;CL:0000837!3.42e-15!165;CL:0002087!8.43e-14!119;CL:0002031!5.36e-13!124;CL:0000542!1.64e-10!53;CL:0000051!1.64e-10!53;CL:0000838!2.15e-10!52;CL:0000766!7.15e-08!76;CL:0000094!7.18e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.34e-17!140;CL:0000988!1.29e-16!182;CL:0000037!2.52e-16!172;CL:0000566!2.52e-16!172;CL:0002032!3.42e-15!165;CL:0000837!3.42e-15!165;CL:0002087!8.43e-14!119;CL:0002031!5.36e-13!124;CL:0000542!1.64e-10!53;CL:0000051!1.64e-10!53;CL:0000838!2.15e-10!52;CL:0000766!7.15e-08!76;CL:0000094!7.18e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.02e-15;8!CL:0000081;4.44e-11;11!CL:0000236;9.58e-11;13!CL:0000542;6.84e-10;53!CL:0000775;3.09e-09;3!CL:0000226;8.17e-09;3!CL:0000842;8.17e-09;3!CL:0000623;5.53e-08;3!CL:0000791;1.93e-07;18!CL:0000789;1.93e-07;18!CL:0002419;1.93e-07;18 | |ontology_enrichment_celltype_v019=CL:0000094;1.02e-15;8!CL:0000081;4.44e-11;11!CL:0000236;9.58e-11;13!CL:0000542;6.84e-10;53!CL:0000775;3.09e-09;3!CL:0000226;8.17e-09;3!CL:0000842;8.17e-09;3!CL:0000623;5.53e-08;3!CL:0000791;1.93e-07;18!CL:0000789;1.93e-07;18!CL:0002419;1.93e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.54e-22,136;CL:0000037,8.42e-18,168;CL:0000988,3.15e-17,177;CL:0000094,5.57e-16,8;CL:0002032,1.18e-15,161;CL:0000837,1.18e-15,161;CL:0000838,2.39e-15,52;CL:0000542,5.97e-15,53;CL:0000051,5.97e-15,53;CL:0002087,7.46e-14,115;CL:0002031,6.52e-13,120;CL:0000081,2.91e-11,11;CL:0000236,6.23e-10,14;CL:0000775,3.17e-09,3;CL:0000226,8.91e-09,3;CL:0000842,8.91e-09,3;CL:0000623,1.18e-08,3;CL:0000825,1.18e-08,3;CL:0000791,8.81e-08,18;CL:0000789,8.81e-08,18;CL:0002420,8.81e-08,18;CL:0002419,8.81e-08,18;CL:0000790,8.81e-08,18;CL:0000766,1.88e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;6.84e-10;53!CL:0000790;1.93e-07;18 | |ontology_enrichment_development_v019=CL:0000051;6.84e-10;53!CL:0000790;1.93e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.28e-09!112;UBERON:0002390!4.89e-09!102;UBERON:0003061!4.89e-09!102 | |ontology_enrichment_uberon=UBERON:0002193!2.28e-09!112;UBERON:0002390!4.89e-09!102;UBERON:0003061!4.89e-09!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-09;15!UBERON:0000179;2.03e-09;15!UBERON:0000463;2.03e-09;15!UBERON:0002390;5.86e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-09;15!UBERON:0000179;2.03e-09;15!UBERON:0000463;2.03e-09;15!UBERON:0002390;5.86e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.90e-09,15;UBERON:0000179,3.90e-09,15;UBERON:0000463,3.90e-09,15;UBERON:0002390,2.15e-08,98;UBERON:0003061,2.15e-08,98;UBERON:0002193,6.45e-08,108 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0.436882744260345,0.527533956456907,0.37129905888014,0,0,0,0,0.487932798790507,0.61560529038394,0,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.840547463227464,0.985207073399349,1.10195093839151,1.57345710739562,1.53531759238885,0.77408061658038,0,0,0,0.0774672005803016,0.142169232487422,0.880801318004542,0.553995408531877,1.40381113229099,0.434021741431704,0.671746422719773,0.32389366601898,0.515151135268373,1.16318591023652,1.13362783106643,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0,0,0,0.941211697713023,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0,0.434377689410233,0,0.736555271975129,0.632924774881769,1.05627643155971,1.4882300997553,1.04829322754188,1.46027220490444,2.4028302854641,1.44653028027372,0.570025487482497,0.79566670879636,0.547992461293902,0,1.09227722252426,0,0.426730222566507,1.20118796110804,1.14950487990897,1.32208974556972,1.90810750907073,1.70763890732835,4.69789751496751,6.88091810625412,0,0,0.526768169550154,0.786839080455332,2.75107533924415,2.87842098599313,0.334372990781356,0.977766799900771,0.946895611469467,0,0.111410456885174,0.294605907474837,1.55073726208535,0,0.384273959177026,0.390178042679635,1.47994114143309,0.829050053357545,0.579606171470105,2.66915813691709,1.33770414044857,4.18142095219907,0.566546713487831,1.53288197440768,1.37450978193052,1.77113784413652,1.59282707162048,1.30216690771284,0,0.301150238155546,0.76791966692651,0,0,0.821127996921047,1.61285394579786,2.67440195783507,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0,0.175669571386252,0.654895377488563,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.953962497221368,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.183201743930407,6.58902087180316,27.1446184903828,0,0,0,0,0.860509862246441,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0,0,0.516628905878827,0,1.23633464639278,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0,0,0,0.179389635688862,0,0,1.20036438433761,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0.484938170456436,0,0,0,0.386521706326594,0,0.286804595389004,0.365921118388786,0,0.464775771478074,0.310983165046111,0.756962552626885,0,0,1.28648187638577,0,0.464367928031979,0,0,0.168584690078102,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.185176890317059,1.3032332212413,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0.594524649154913,0,0,0,0.179117045405697,0,0.383382679165211,0,0.44024217006613,2.07328115540772,21.0415131988764,1.64115163454294,0.317489471460845,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.336255431980582,2.75843064282698,1.94064817373566,1.92514554419623,1.27047312111232,0,0,0.167516265334349,0,11.2351053592077,8.97484377612075,9.94597232246485,0.49076596687656,0.500170521059677,0.271265023699736,0,0.356857977594324,0.157702415033935,0.35142424497814,0,2.27407504055985,2.0694614258501,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,1.02943027143257,2.27444828735176,2.5885704098234,2.45473382947922,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0.241718899183244,0.200506470303285,0,0.34444334449382,0,0.655622074797121,0,0,0,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0,0.831076008928724,0.447749509444357,0,0.261435451024901,0,0.328014645699706,0,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0.426133137080504,0.267096106940212,0.495854746082934,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0.511795582622668,0,0,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.844430541190656,0,0,0.699869440489966,0,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,1.01489521846434,0.764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|short_description=p@chr2:43453083..43453099,- | |short_description=p@chr2:43453083..43453099,- | ||
}} | }} |
Latest revision as of 10:16, 29 July 2015
Short description: | p@chr2:43453083..43453099, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43453083..43453099, - |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.54e-22 | 136 |
hematopoietic stem cell | 8.42e-18 | 168 |
hematopoietic cell | 3.15e-17 | 177 |
granulocyte | 5.57e-16 | 8 |
hematopoietic oligopotent progenitor cell | 1.18e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-15 | 161 |
lymphoid lineage restricted progenitor cell | 2.39e-15 | 52 |
lymphocyte | 5.97e-15 | 53 |
common lymphoid progenitor | 5.97e-15 | 53 |
nongranular leukocyte | 7.46e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 6.52e-13 | 120 |
blood cell | 2.91e-11 | 11 |
B cell | 6.23e-10 | 14 |
neutrophil | 3.17e-09 | 3 |
single nucleate cell | 8.91e-09 | 3 |
mononuclear cell | 8.91e-09 | 3 |
natural killer cell | 1.18e-08 | 3 |
pro-NK cell | 1.18e-08 | 3 |
mature alpha-beta T cell | 8.81e-08 | 18 |
alpha-beta T cell | 8.81e-08 | 18 |
immature T cell | 8.81e-08 | 18 |
mature T cell | 8.81e-08 | 18 |
immature alpha-beta T cell | 8.81e-08 | 18 |
myeloid leukocyte | 1.88e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 3.90e-09 | 15 |
haemolymphatic fluid | 3.90e-09 | 15 |
organism substance | 3.90e-09 | 15 |
hematopoietic system | 2.15e-08 | 98 |
blood island | 2.15e-08 | 98 |
hemolymphoid system | 6.45e-08 | 108 |