FFCP PHASE1:Hg19::chr2:113694424..113694429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113694424..113694429,+ | |||
|description=CAGE_peak_at_chr2:113694424..113694429,+ | |description=CAGE_peak_at_chr2:113694424..113694429,+ | ||
|id=chr2:113694424..113694429,+ | |id=chr2:113694424..113694429,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.31e-29!112;CL:0000049!2.31e-29!112;CL:0000557!9.36e-23!71;CL:0000839!6.30e-22!70;CL:0002057!8.43e-22!42;CL:0000766!1.56e-21!76;CL:0002009!5.70e-21!65;CL:0002194!1.12e-20!63;CL:0000576!1.12e-20!63;CL:0000040!1.12e-20!63;CL:0000559!1.12e-20!63;CL:0000860!1.31e-19!45;CL:0000037!2.35e-17!172;CL:0000566!2.35e-17!172;CL:0002032!5.16e-16!165;CL:0000837!5.16e-16!165;CL:0000988!3.11e-15!182;CL:0000063!6.09e-13!578;CL:0000134!1.58e-11!358;CL:0000738!5.64e-11!140;CL:0002320!9.01e-11!365;CL:0002202!1.12e-10!9;CL:0002632!1.12e-10!9;CL:0000012!2.66e-10!682;CL:0000219!2.82e-10!390;CL:0002031!1.58e-09!124;CL:0000548!1.69e-09!679;CL:0000004!1.69e-09!679;CL:0000255!1.69e-09!679;CL:0002087!1.30e-08!119;CL:0002368!3.86e-08!13;CL:0000003!1.16e-07!722;CL:0000144!1.54e-07!625;CL:0000048!2.89e-07!430;CL:0000034!6.26e-07!444;CL:0000723!8.22e-07!436 | |ontology_enrichment_celltype=CL:0000763!2.31e-29!112;CL:0000049!2.31e-29!112;CL:0000557!9.36e-23!71;CL:0000839!6.30e-22!70;CL:0002057!8.43e-22!42;CL:0000766!1.56e-21!76;CL:0002009!5.70e-21!65;CL:0002194!1.12e-20!63;CL:0000576!1.12e-20!63;CL:0000040!1.12e-20!63;CL:0000559!1.12e-20!63;CL:0000860!1.31e-19!45;CL:0000037!2.35e-17!172;CL:0000566!2.35e-17!172;CL:0002032!5.16e-16!165;CL:0000837!5.16e-16!165;CL:0000988!3.11e-15!182;CL:0000063!6.09e-13!578;CL:0000134!1.58e-11!358;CL:0000738!5.64e-11!140;CL:0002320!9.01e-11!365;CL:0002202!1.12e-10!9;CL:0002632!1.12e-10!9;CL:0000012!2.66e-10!682;CL:0000219!2.82e-10!390;CL:0002031!1.58e-09!124;CL:0000548!1.69e-09!679;CL:0000004!1.69e-09!679;CL:0000255!1.69e-09!679;CL:0002087!1.30e-08!119;CL:0002368!3.86e-08!13;CL:0000003!1.16e-07!722;CL:0000144!1.54e-07!625;CL:0000048!2.89e-07!430;CL:0000034!6.26e-07!444;CL:0000723!8.22e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.91e-25;33!CL:0002057;5.91e-25;33!CL:0000473;1.36e-18;39!CL:0000234;1.36e-18;39!CL:0000576;5.96e-14;48!CL:0002202;8.77e-13;9!CL:0002632;8.77e-13;9!CL:0000766;1.18e-11;69!CL:0000763;1.17e-08;100!CL:0002368;1.19e-08;13 | |ontology_enrichment_celltype_v019=CL:0000860;5.91e-25;33!CL:0002057;5.91e-25;33!CL:0000473;1.36e-18;39!CL:0000234;1.36e-18;39!CL:0000576;5.96e-14;48!CL:0002202;8.77e-13;9!CL:0002632;8.77e-13;9!CL:0000766;1.18e-11;69!CL:0000763;1.17e-08;100!CL:0002368;1.19e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-28,42;CL:0002057,1.68e-28,42;CL:0000473,5.87e-27,48;CL:0000234,5.87e-27,48;CL:0002194,9.93e-23,59;CL:0000576,9.93e-23,59;CL:0000040,9.93e-23,59;CL:0000559,9.93e-23,59;CL:0002009,8.26e-22,61;CL:0000839,9.43e-20,66;CL:0000763,1.22e-19,108;CL:0000049,1.22e-19,108;CL:0000766,1.51e-19,72;CL:0000557,2.23e-19,67;CL:0002202,1.14e-12,9;CL:0002632,1.14e-12,9;CL:0002032,6.71e-12,161;CL:0000837,6.71e-12,161;CL:0000037,4.19e-11,168;CL:0002087,3.36e-10,115;CL:0000988,3.53e-10,177;CL:0002031,1.50e-09,120;CL:0000738,1.02e-08,136;CL:0002368,1.42e-08,13 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-21;42!UBERON:0007123;7.33e-07;5 | |ontology_enrichment_development_v019=CL:0002057;2.63e-21;42!UBERON:0007123;7.33e-07;5 | ||
|ontology_enrichment_disease=DOID:8692!1.61e-10!31;DOID:1240!9.33e-09!39;DOID:14566!1.91e-08!239;DOID:162!4.29e-08!235;DOID:1036!4.90e-08!8;DOID:2531!4.64e-07!51;DOID:0060083!4.64e-07!51 | |ontology_enrichment_disease=DOID:8692!1.61e-10!31;DOID:1240!9.33e-09!39;DOID:14566!1.91e-08!239;DOID:162!4.29e-08!235;DOID:1036!4.90e-08!8;DOID:2531!4.64e-07!51;DOID:0060083!4.64e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;8.91e-11;8!DOID:1909;7.24e-08;2!DOID:3910;2.36e-07;2 | |ontology_enrichment_disease_v019=DOID:1036;8.91e-11;8!DOID:1909;7.24e-08;2!DOID:3910;2.36e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,9.92e-11,8;DOID:1909,6.54e-08,2;DOID:3910,3.29e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-21!80;UBERON:0001474!4.48e-19!86;UBERON:0002390!3.15e-16!102;UBERON:0003061!3.15e-16!102;UBERON:0002405!3.46e-15!115;UBERON:0002193!4.57e-15!112;UBERON:0004765!6.88e-15!101;UBERON:0001434!6.88e-15!101;UBERON:0002384!9.31e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!1.17e-21!80;UBERON:0001474!4.48e-19!86;UBERON:0002390!3.15e-16!102;UBERON:0003061!3.15e-16!102;UBERON:0002405!3.46e-15!115;UBERON:0002193!4.57e-15!112;UBERON:0004765!6.88e-15!101;UBERON:0001434!6.88e-15!101;UBERON:0002384!9.31e-10!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.07e-07;15!UBERON:0001558;2.07e-07;15!UBERON:0004903;2.36e-07;2!UBERON:0002173;2.36e-07;2!UBERON:0002186;2.36e-07;2!UBERON:0002046;7.33e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0007196;2.07e-07;15!UBERON:0001558;2.07e-07;15!UBERON:0004903;2.36e-07;2!UBERON:0002173;2.36e-07;2!UBERON:0002186;2.36e-07;2!UBERON:0002046;7.33e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-16,76;UBERON:0001474,7.45e-15,82;UBERON:0004765,4.61e-13,90;UBERON:0002405,1.80e-12,93;UBERON:0002390,1.44e-11,98;UBERON:0003061,1.44e-11,98;UBERON:0001434,3.12e-11,100;UBERON:0002193,5.12e-10,108;UBERON:0007196,2.41e-07,15;UBERON:0001558,2.41e-07,15;UBERON:0004903,3.29e-07,2;UBERON:0002173,3.29e-07,2;UBERON:0002186,3.29e-07,2;UBERON:0002046,9.62e-07,5;UBERON:0004117,9.62e-07,5;UBERON:0007689,9.62e-07,5;UBERON:0007123,9.62e-07,5;UBERON:0003091,9.62e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,3.09632246632152,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0.293600439334847,3.87796785972314,2.4065333696417,2.82114131930607,0,0,0,0.581592955118259,0,0,1.39457422143411,1.23350366406548,0.309706370895104,1.1507695692886,3.33008918487831,1.6553756092201,8.96338769915208,4.51839278508678,2.70852973188684,0.564727018627814,0,0.224723484445085,11.6311879100943,8.34415470397843,7.67204550958849,0.989553900560148,0.199463657621632,0,4.35313857942876,3.40431134814684,3.73693349397345,0.251248665256743,0,0.65156653411535,3.63239701580021,2.57794345191295,4.43047342417238,0,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.891786973732369,0,0,0.425325291727159,0,0,0,0,0.176096868026452,0.414656231081544,0.864719720501769,0.6312121671319,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.177561725313127,0.0821271560138091,3.11552657510173,0.581051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.551346289938122,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,0.384888450902048,2.01090682660736,5.44454924306613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0,0,0,0.783399478865116,0,0,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.921722292925374,0.447352215784832,0.333698283423817,0.586164286206121,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,1.13654458722565,0,0,0,0,0,1.00177834520615,4.61450847834927,0,0,0,0,0,0,0,0.808815160325942,0,4.09257896181497,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0,0,0,0.0915975934018623,0,0,2.98262487150547,0.664846727600626,0.676786981851542,0.784250137270958,1.00692952185506,10.246701567106,1.43042921082341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0.783532859223623,0,0.171986032471617,0,0,0,0,0,0,9.18180895133231,3.57686301065381,0.0633107959558787,0,0.480952921509202,0,0,0,0,0,1.4405479798815,0.248505071130865,0,0.815425236441684,0.627617077873999,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0.0607495566580247,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,14.1199135688863,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54947352624943,1.42732666772484,0.705797459094515,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.621748802331122,0.295710299979268,0.318593534327405,0,0.621051827505038,0,0,1.5652351854352,0.150257608997218,0,2.03435366602331,1.81848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.906823702049089,1.85217979459067,0.734210113519403,0.71635536432595,0,0.219284049578707,0.706756583783524,0,0,0,0,0.303859956177382,0,0.389720617678777,0,0.327130788511688,0,0.245772908753719,1.47918486351039,0,0.106691729694141,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,1.03973099535304,0,0,0,0,0,0,0,3.27543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.766920642832419,0,0.22910686854405,0.93061915699296,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73709851806233,0,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr2:113694424..113694429,+ | |short_description=p@chr2:113694424..113694429,+ | ||
}} | }} |
Latest revision as of 23:31, 28 July 2015
Short description: | p@chr2:113694424..113694429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113694424..113694429, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-28 | 42 |
defensive cell | 5.87e-27 | 48 |
phagocyte | 5.87e-27 | 48 |
monopoietic cell | 9.93e-23 | 59 |
monocyte | 9.93e-23 | 59 |
monoblast | 9.93e-23 | 59 |
promonocyte | 9.93e-23 | 59 |
macrophage dendritic cell progenitor | 8.26e-22 | 61 |
myeloid lineage restricted progenitor cell | 9.43e-20 | 66 |
myeloid cell | 1.22e-19 | 108 |
common myeloid progenitor | 1.22e-19 | 108 |
myeloid leukocyte | 1.51e-19 | 72 |
granulocyte monocyte progenitor cell | 2.23e-19 | 67 |
epithelial cell of tracheobronchial tree | 1.14e-12 | 9 |
epithelial cell of lower respiratory tract | 1.14e-12 | 9 |
hematopoietic oligopotent progenitor cell | 6.71e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.71e-12 | 161 |
hematopoietic stem cell | 4.19e-11 | 168 |
nongranular leukocyte | 3.36e-10 | 115 |
hematopoietic cell | 3.53e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.50e-09 | 120 |
leukocyte | 1.02e-08 | 136 |
respiratory epithelial cell | 1.42e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.90e-16 | 76 |
bone element | 7.45e-15 | 82 |
skeletal element | 4.61e-13 | 90 |
immune system | 1.80e-12 | 93 |
hematopoietic system | 1.44e-11 | 98 |
blood island | 1.44e-11 | 98 |
skeletal system | 3.12e-11 | 100 |
hemolymphoid system | 5.12e-10 | 108 |
tracheobronchial tree | 2.41e-07 | 15 |
lower respiratory tract | 2.41e-07 | 15 |
bronchoalveolar duct junction | 3.29e-07 | 2 |
alveolar duct | 3.29e-07 | 2 |
bronchiole | 3.29e-07 | 2 |
thyroid gland | 9.62e-07 | 5 |
pharyngeal pouch | 9.62e-07 | 5 |
thyroid diverticulum | 9.62e-07 | 5 |
pharyngeal pouch 2 | 9.62e-07 | 5 |
thyroid primordium | 9.62e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.92e-11 | 8 |
melanoma | 6.54e-08 | 2 |
lung adenocarcinoma | 3.29e-07 | 2 |