FFCP PHASE1:Hg19::chr15:33447022..33447035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33447022..33447035,- | |||
|coexpression_cluster_id=C897 | |coexpression_cluster_id=C897 | ||
|description=CAGE_peak_at_chr15:33447022..33447035,- | |description=CAGE_peak_at_chr15:33447022..33447035,- | ||
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|ontology_enrichment_celltype=CL:0002194!1.51e-29!63;CL:0000576!1.51e-29!63;CL:0000040!1.51e-29!63;CL:0000559!1.51e-29!63;CL:0002057!1.93e-29!42;CL:0002009!3.74e-28!65;CL:0000860!1.30e-26!45;CL:0000839!4.95e-25!70;CL:0000766!1.56e-24!76;CL:0000557!1.84e-24!71;CL:0000763!2.66e-13!112;CL:0000049!2.66e-13!112;CL:0002087!1.75e-11!119;CL:0000738!4.40e-10!140;CL:0002031!1.21e-08!124;CL:0000148!6.05e-07!10;CL:0000541!6.05e-07!10 | |ontology_enrichment_celltype=CL:0002194!1.51e-29!63;CL:0000576!1.51e-29!63;CL:0000040!1.51e-29!63;CL:0000559!1.51e-29!63;CL:0002057!1.93e-29!42;CL:0002009!3.74e-28!65;CL:0000860!1.30e-26!45;CL:0000839!4.95e-25!70;CL:0000766!1.56e-24!76;CL:0000557!1.84e-24!71;CL:0000763!2.66e-13!112;CL:0000049!2.66e-13!112;CL:0002087!1.75e-11!119;CL:0000738!4.40e-10!140;CL:0002031!1.21e-08!124;CL:0000148!6.05e-07!10;CL:0000541!6.05e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-54;33!CL:0002057;2.21e-54;33!CL:0000473;2.64e-42;39!CL:0000234;2.64e-42;39!CL:0000576;1.62e-37;48!CL:0000766;6.26e-22;69!CL:0000148;1.10e-19;10!CL:0000147;9.37e-14;14!CL:0002619;2.05e-13;3!CL:0002567;6.49e-13;3!CL:0000763;2.43e-10;100!CL:0002087;7.29e-10;104!CL:0000710;2.62e-09;20 | |ontology_enrichment_celltype_v019=CL:0000860;2.21e-54;33!CL:0002057;2.21e-54;33!CL:0000473;2.64e-42;39!CL:0000234;2.64e-42;39!CL:0000576;1.62e-37;48!CL:0000766;6.26e-22;69!CL:0000148;1.10e-19;10!CL:0000147;9.37e-14;14!CL:0002619;2.05e-13;3!CL:0002567;6.49e-13;3!CL:0000763;2.43e-10;100!CL:0002087;7.29e-10;104!CL:0000710;2.62e-09;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.75e-55,42;CL:0002057,5.75e-55,42;CL:0000473,2.42e-51,48;CL:0000234,2.42e-51,48;CL:0002194,1.33e-50,59;CL:0000576,1.33e-50,59;CL:0000040,1.33e-50,59;CL:0000559,1.33e-50,59;CL:0002009,9.89e-49,61;CL:0000839,1.53e-44,66;CL:0000557,8.85e-44,67;CL:0000766,3.51e-43,72;CL:0000763,1.98e-26,108;CL:0000049,1.98e-26,108;CL:0002087,1.24e-22,115;CL:0002031,2.13e-21,120;CL:0000148,8.54e-20,10;CL:0000541,8.54e-20,10;CL:0000738,1.66e-19,136;CL:0002032,2.30e-15,161;CL:0000837,2.30e-15,161;CL:0000037,1.99e-14,168;CL:0000147,7.84e-14,14;CL:0002619,2.14e-13,3;CL:0000988,2.48e-13,177;CL:0002567,4.64e-13,3;CL:0000710,2.33e-09,20;CL:0000219,3.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.98e-44;42!CL:0000049;4.28e-08;108 | |ontology_enrichment_development_v019=CL:0002057;3.98e-44;42!CL:0000049;4.28e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.53e-09;2 | |ontology_enrichment_disease_v019=DOID:1909;1.53e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.47e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-24!57;UBERON:0005068!1.13e-24!57;UBERON:0006241!1.13e-24!57;UBERON:0007135!1.13e-24!57;UBERON:0007023!6.51e-22!115;UBERON:0002390!1.87e-21!102;UBERON:0003061!1.87e-21!102;UBERON:0000955!2.83e-20!69;UBERON:0006238!2.83e-20!69;UBERON:0002616!3.66e-20!59;UBERON:0002371!5.23e-20!80;UBERON:0002193!1.15e-19!112;UBERON:0001474!1.79e-19!86;UBERON:0001017!3.01e-19!82;UBERON:0005743!6.26e-19!86;UBERON:0003075!1.60e-17!86;UBERON:0007284!1.60e-17!86;UBERON:0000073!1.95e-17!94;UBERON:0001016!1.95e-17!94;UBERON:0004765!7.77e-17!101;UBERON:0001434!7.77e-17!101;UBERON:0003080!1.68e-16!42;UBERON:0002346!4.18e-16!90;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0002020!1.91e-14!34;UBERON:0003528!1.91e-14!34;UBERON:0002405!2.22e-14!115;UBERON:0001893!4.26e-14!34;UBERON:0002791!2.34e-13!33;UBERON:0003056!2.67e-13!61;UBERON:0001869!1.98e-12!32;UBERON:0000033!7.99e-12!123;UBERON:0000153!3.12e-11!129;UBERON:0007811!3.12e-11!129;UBERON:0000062!1.09e-10!511;UBERON:0002619!1.37e-10!22;UBERON:0002204!7.04e-10!167;UBERON:0000467!8.36e-10!625;UBERON:0002298!8.57e-10!8;UBERON:0000480!1.01e-09!626;UBERON:0000923!1.10e-09!604;UBERON:0005291!1.10e-09!604;UBERON:0006598!1.10e-09!604;UBERON:0002532!1.10e-09!604;UBERON:0002050!1.33e-09!605;UBERON:0005423!1.33e-09!605;UBERON:0003076!1.41e-09!15;UBERON:0003057!1.41e-09!15;UBERON:0000922!1.82e-09!612;UBERON:0001950!6.43e-09!20;UBERON:0000956!8.20e-09!25;UBERON:0000203!8.20e-09!25;UBERON:0004121!9.15e-09!169;UBERON:0000924!3.17e-08!173;UBERON:0006601!3.17e-08!173;UBERON:0002308!1.02e-07!9;UBERON:0000125!1.02e-07!9;UBERON:0000468!1.07e-07!659;UBERON:0002420!1.10e-07!9;UBERON:0007245!1.10e-07!9;UBERON:0010009!1.10e-07!9;UBERON:0010011!1.10e-07!9;UBERON:0000454!1.10e-07!9;UBERON:0004733!9.76e-07!12;UBERON:0002028!9.76e-07!12;UBERON:0007277!9.76e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!1.13e-24!57;UBERON:0005068!1.13e-24!57;UBERON:0006241!1.13e-24!57;UBERON:0007135!1.13e-24!57;UBERON:0007023!6.51e-22!115;UBERON:0002390!1.87e-21!102;UBERON:0003061!1.87e-21!102;UBERON:0000955!2.83e-20!69;UBERON:0006238!2.83e-20!69;UBERON:0002616!3.66e-20!59;UBERON:0002371!5.23e-20!80;UBERON:0002193!1.15e-19!112;UBERON:0001474!1.79e-19!86;UBERON:0001017!3.01e-19!82;UBERON:0005743!6.26e-19!86;UBERON:0003075!1.60e-17!86;UBERON:0007284!1.60e-17!86;UBERON:0000073!1.95e-17!94;UBERON:0001016!1.95e-17!94;UBERON:0004765!7.77e-17!101;UBERON:0001434!7.77e-17!101;UBERON:0003080!1.68e-16!42;UBERON:0002346!4.18e-16!90;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0002020!1.91e-14!34;UBERON:0003528!1.91e-14!34;UBERON:0002405!2.22e-14!115;UBERON:0001893!4.26e-14!34;UBERON:0002791!2.34e-13!33;UBERON:0003056!2.67e-13!61;UBERON:0001869!1.98e-12!32;UBERON:0000033!7.99e-12!123;UBERON:0000153!3.12e-11!129;UBERON:0007811!3.12e-11!129;UBERON:0000062!1.09e-10!511;UBERON:0002619!1.37e-10!22;UBERON:0002204!7.04e-10!167;UBERON:0000467!8.36e-10!625;UBERON:0002298!8.57e-10!8;UBERON:0000480!1.01e-09!626;UBERON:0000923!1.10e-09!604;UBERON:0005291!1.10e-09!604;UBERON:0006598!1.10e-09!604;UBERON:0002532!1.10e-09!604;UBERON:0002050!1.33e-09!605;UBERON:0005423!1.33e-09!605;UBERON:0003076!1.41e-09!15;UBERON:0003057!1.41e-09!15;UBERON:0000922!1.82e-09!612;UBERON:0001950!6.43e-09!20;UBERON:0000956!8.20e-09!25;UBERON:0000203!8.20e-09!25;UBERON:0004121!9.15e-09!169;UBERON:0000924!3.17e-08!173;UBERON:0006601!3.17e-08!173;UBERON:0002308!1.02e-07!9;UBERON:0000125!1.02e-07!9;UBERON:0000468!1.07e-07!659;UBERON:0002420!1.10e-07!9;UBERON:0007245!1.10e-07!9;UBERON:0010009!1.10e-07!9;UBERON:0010011!1.10e-07!9;UBERON:0000454!1.10e-07!9;UBERON:0004733!9.76e-07!12;UBERON:0002028!9.76e-07!12;UBERON:0007277!9.76e-07!12 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.44e-38,76;UBERON:0001474,1.55e-34,82;UBERON:0004765,7.46e-31,90;UBERON:0002405,1.23e-29,93;UBERON:0002390,9.07e-28,98;UBERON:0003061,9.07e-28,98;UBERON:0001434,4.49e-27,100;UBERON:0002193,1.49e-24,108;UBERON:0002204,2.03e-13,167;UBERON:0003081,7.77e-10,203 | |||
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| ||
|short_description=p@chr15:33447022..33447035,- | |short_description=p@chr15:33447022..33447035,- | ||
}} | }} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33447022..33447035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33447022..33447035, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.75e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.75e-55 | 42 |
defensive cell | 2.42e-51 | 48 |
phagocyte | 2.42e-51 | 48 |
monopoietic cell | 1.33e-50 | 59 |
monocyte | 1.33e-50 | 59 |
monoblast | 1.33e-50 | 59 |
promonocyte | 1.33e-50 | 59 |
macrophage dendritic cell progenitor | 9.89e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.53e-44 | 66 |
granulocyte monocyte progenitor cell | 8.85e-44 | 67 |
myeloid leukocyte | 3.51e-43 | 72 |
myeloid cell | 1.98e-26 | 108 |
common myeloid progenitor | 1.98e-26 | 108 |
nongranular leukocyte | 1.24e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.13e-21 | 120 |
melanocyte | 8.54e-20 | 10 |
melanoblast | 8.54e-20 | 10 |
leukocyte | 1.66e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-15 | 161 |
hematopoietic stem cell | 1.99e-14 | 168 |
pigment cell | 7.84e-14 | 14 |
adult endothelial progenitor cell | 2.14e-13 | 3 |
hematopoietic cell | 2.48e-13 | 177 |
light melanocyte | 4.64e-13 | 3 |
neurecto-epithelial cell | 2.33e-09 | 20 |
motile cell | 3.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.44e-38 | 76 |
bone element | 1.55e-34 | 82 |
skeletal element | 7.46e-31 | 90 |
immune system | 1.23e-29 | 93 |
hematopoietic system | 9.07e-28 | 98 |
blood island | 9.07e-28 | 98 |
skeletal system | 4.49e-27 | 100 |
hemolymphoid system | 1.49e-24 | 108 |
musculoskeletal system | 2.03e-13 | 167 |
lateral plate mesoderm | 7.77e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.47e-09 | 2 |