FFCP PHASE1:Hg19::chr1:28696264..28696275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65979 | |EntrezGene=65979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25793 | |HGNC=25793 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000493669_5end | |association_with_transcript=9bp_to_ENST00000493669_5end | ||
|cluster_id=chr1:28696264..28696275,+ | |||
|description=CAGE_peak_5_at_PHACTR4_5end | |description=CAGE_peak_5_at_PHACTR4_5end | ||
|id=chr1:28696264..28696275,+ | |id=chr1:28696264..28696275,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.54e-22!254 | |ontology_enrichment_celltype=CL:0000066!2.54e-22!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.49e-13,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.12e-15!106;DOID:0050687!1.62e-15!143;DOID:162!8.54e-14!235;DOID:14566!8.87e-13!239 | |ontology_enrichment_disease=DOID:305!1.12e-15!106;DOID:0050687!1.62e-15!143;DOID:162!8.54e-14!235;DOID:14566!8.87e-13!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.74e-10,106;DOID:0050687,1.68e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!6.41e-10!126;UBERON:0004119!7.35e-10!169;UBERON:0000925!7.35e-10!169;UBERON:0006595!7.35e-10!169;UBERON:0001048!2.03e-09!168;UBERON:0001007!5.54e-09!155;UBERON:0001555!5.54e-09!155;UBERON:0007026!5.54e-09!155;UBERON:0004921!5.85e-09!129;UBERON:0004185!5.85e-09!129;UBERON:0005177!7.74e-09!107;UBERON:0009569!3.63e-08!113;UBERON:0000464!6.19e-08!104;UBERON:0000481!1.02e-07!347;UBERON:0000077!1.21e-07!130;UBERON:0000062!1.33e-07!511;UBERON:0000475!1.93e-07!365;UBERON:0005172!2.43e-07!55;UBERON:0005173!2.43e-07!55;UBERON:0003104!8.97e-07!238;UBERON:0009142!8.97e-07!238 | |ontology_enrichment_uberon=UBERON:0000466!6.41e-10!126;UBERON:0004119!7.35e-10!169;UBERON:0000925!7.35e-10!169;UBERON:0006595!7.35e-10!169;UBERON:0001048!2.03e-09!168;UBERON:0001007!5.54e-09!155;UBERON:0001555!5.54e-09!155;UBERON:0007026!5.54e-09!155;UBERON:0004921!5.85e-09!129;UBERON:0004185!5.85e-09!129;UBERON:0005177!7.74e-09!107;UBERON:0009569!3.63e-08!113;UBERON:0000464!6.19e-08!104;UBERON:0000481!1.02e-07!347;UBERON:0000077!1.21e-07!130;UBERON:0000062!1.33e-07!511;UBERON:0000475!1.93e-07!365;UBERON:0005172!2.43e-07!55;UBERON:0005173!2.43e-07!55;UBERON:0003104!8.97e-07!238;UBERON:0009142!8.97e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.94e-08;31!UBERON:0002330;2.94e-08;31!UBERON:0005172;1.75e-07;52!UBERON:0005173;1.75e-07;52!UBERON:0002423;2.62e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002365;2.94e-08;31!UBERON:0002330;2.94e-08;31!UBERON:0005172;1.75e-07;52!UBERON:0005173;1.75e-07;52!UBERON:0002423;2.62e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.92e-10,101;UBERON:0005172,2.13e-10,54;UBERON:0005173,2.13e-10,54;UBERON:0002417,3.34e-09,60;UBERON:0000916,3.34e-09,60;UBERON:0001048,1.35e-08,160;UBERON:0002365,3.28e-08,31;UBERON:0002330,3.28e-08,31;UBERON:0009569,4.21e-08,112;UBERON:0009497,3.72e-07,25;UBERON:0000015,3.72e-07,25;UBERON:0002423,3.72e-07,25;UBERON:0006235,3.72e-07,25;UBERON:0004161,3.72e-07,25 | |||
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| ||
|short_description=p5@PHACTR4 | |short_description=p5@PHACTR4 | ||
}} | }} |
Latest revision as of 10:19, 17 September 2015
Short description: | p5@PHACTR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHACTR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000493669_5end |
EntrezGene: | PHACTR4 |
HGNC: | 25793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.49e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.92e-10 | 101 |
abdomen element | 2.13e-10 | 54 |
abdominal segment element | 2.13e-10 | 54 |
abdominal segment of trunk | 3.34e-09 | 60 |
abdomen | 3.34e-09 | 60 |
primordium | 1.35e-08 | 160 |
exocrine gland | 3.28e-08 | 31 |
exocrine system | 3.28e-08 | 31 |
subdivision of trunk | 4.21e-08 | 112 |
epithelium of foregut-midgut junction | 3.72e-07 | 25 |
anatomical boundary | 3.72e-07 | 25 |
hepatobiliary system | 3.72e-07 | 25 |
foregut-midgut junction | 3.72e-07 | 25 |
septum transversum | 3.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.74e-10 | 106 |
cell type cancer | 1.68e-08 | 143 |