FFCP PHASE1:Hg19::chr21:42539445..42539456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100423023 | |EntrezGene=100423023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38366 | |HGNC=38366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_NR_036167_5end | |association_with_transcript=-27bp_to_NR_036167_5end | ||
|cluster_id=chr21:42539445..42539456,+ | |||
|description=CAGE_peak_1_at_MIR3197_5end | |description=CAGE_peak_1_at_MIR3197_5end | ||
|id=chr21:42539445..42539456,+ | |id=chr21:42539445..42539456,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.03e-14!24;CL:0005020!6.22e-11!6;CL:0002138!6.22e-11!6;CL:0005022!6.22e-11!6;CL:0000115!1.03e-09!35;CL:0002274!1.07e-09!5;CL:0000457!1.07e-09!5;CL:0002191!1.07e-09!5;CL:0000097!1.07e-09!5;CL:0000831!1.07e-09!5;CL:0002028!1.07e-09!5;CL:0002078!1.01e-08!44;CL:0000213!6.30e-08!57;CL:0000215!6.30e-08!57;CL:0000071!3.56e-07!18;CL:0002546!3.56e-07!18 | |ontology_enrichment_celltype=CL:0002139!2.03e-14!24;CL:0005020!6.22e-11!6;CL:0002138!6.22e-11!6;CL:0005022!6.22e-11!6;CL:0000115!1.03e-09!35;CL:0002274!1.07e-09!5;CL:0000457!1.07e-09!5;CL:0002191!1.07e-09!5;CL:0000097!1.07e-09!5;CL:0000831!1.07e-09!5;CL:0002028!1.07e-09!5;CL:0002078!1.01e-08!44;CL:0000213!6.30e-08!57;CL:0000215!6.30e-08!57;CL:0000071!3.56e-07!18;CL:0002546!3.56e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.00e-46;5!CL:0000163;8.66e-26;9!CL:0002138;3.77e-22;6!CL:0002139;7.62e-15;24!CL:0000115;2.90e-09;36!CL:0002078;7.67e-07;45 | |ontology_enrichment_celltype_v019=CL:0000097;5.00e-46;5!CL:0000163;8.66e-26;9!CL:0002138;3.77e-22;6!CL:0002139;7.62e-15;24!CL:0000115;2.90e-09;36!CL:0002078;7.67e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.97e-46,5;CL:0002028,3.97e-46,5;CL:0000163,7.63e-26,9;CL:0005020,3.51e-22,6;CL:0002138,3.51e-22,6;CL:0005022,3.51e-22,6;CL:0002139,6.79e-15,24;CL:0000115,6.27e-10,36;CL:0002078,6.22e-08,45 | |||
|ontology_enrichment_development_v019=CL:0005022;3.77e-22;6!UBERON:0005425;2.06e-15;1 | |ontology_enrichment_development_v019=CL:0005022;3.77e-22;6!UBERON:0005425;2.06e-15;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.33e-10!9;UBERON:0002465!3.35e-08!10;UBERON:0000477!3.62e-08!286;UBERON:0001473!6.77e-08!8;UBERON:0004536!6.77e-08!8;UBERON:0006558!6.77e-08!8;UBERON:0001986!3.56e-07!18;UBERON:0004638!3.56e-07!18;UBERON:0004852!3.56e-07!18 | |ontology_enrichment_uberon=UBERON:0001737!1.33e-10!9;UBERON:0002465!3.35e-08!10;UBERON:0000477!3.62e-08!286;UBERON:0001473!6.77e-08!8;UBERON:0004536!6.77e-08!8;UBERON:0006558!6.77e-08!8;UBERON:0001986!3.56e-07!18;UBERON:0004638!3.56e-07!18;UBERON:0004852!3.56e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.71e-17;8!UBERON:0004536;8.71e-17;8!UBERON:0006558;8.71e-17;8!UBERON:0000996;2.06e-15;1!UBERON:0002134;2.06e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0005208;2.06e-15;1!UBERON:0004145;2.06e-15;1!UBERON:0005946;2.06e-15;1!UBERON:0005965;2.06e-15;1!UBERON:0002078;2.06e-15;1!UBERON:0002465;1.47e-13;10!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002081;2.31e-08;2!UBERON:0002133;2.31e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001473;8.71e-17;8!UBERON:0004536;8.71e-17;8!UBERON:0006558;8.71e-17;8!UBERON:0000996;2.06e-15;1!UBERON:0002134;2.06e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0005208;2.06e-15;1!UBERON:0004145;2.06e-15;1!UBERON:0005946;2.06e-15;1!UBERON:0005965;2.06e-15;1!UBERON:0002078;2.06e-15;1!UBERON:0002465;1.47e-13;10!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002081;2.31e-08;2!UBERON:0002133;2.31e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,8.26e-17,8;UBERON:0004536,8.26e-17,8;UBERON:0006558,8.26e-17,8;UBERON:0000996,1.16e-15,1;UBERON:0002134,2.75e-15,1;UBERON:0005208,2.75e-15,1;UBERON:0005946,2.75e-15,1;UBERON:0005965,2.75e-15,1;UBERON:0002078,2.75e-15,1;UBERON:0000941,3.17e-15,1;UBERON:0001785,3.17e-15,1;UBERON:0002464,3.17e-15,1;UBERON:0004904,3.17e-15,1;UBERON:0001021,3.17e-15,1;UBERON:0003902,3.17e-15,1;UBERON:0005425,3.17e-15,1;UBERON:0002465,1.41e-13,10;UBERON:0002081,2.67e-08,2;UBERON:0002133,2.67e-08,2;UBERON:0010227,2.67e-08,2;UBERON:0003714,2.87e-08,2;UBERON:0005162,2.87e-08,2;UBERON:0000122,2.87e-08,2;UBERON:0000055,2.92e-07,68;UBERON:0002405,5.52e-07,93 | |||
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|short_description=p1@MIR3197 | |short_description=p1@MIR3197 | ||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p1@MIR3197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3197_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_NR_036167_5end |
EntrezGene: | MIR3197 |
HGNC: | 38366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.97e-46 | 5 |
basophil mast progenitor cell | 3.97e-46 | 5 |
endocrine cell | 7.63e-26 | 9 |
lymphangioblast | 3.51e-22 | 6 |
endothelial cell of lymphatic vessel | 3.51e-22 | 6 |
vascular lymphangioblast | 3.51e-22 | 6 |
endothelial cell of vascular tree | 6.79e-15 | 24 |
endothelial cell | 6.27e-10 | 36 |
meso-epithelial cell | 6.22e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 8.26e-17 | 8 |
lymph vasculature | 8.26e-17 | 8 |
lymphatic part of lymphoid system | 8.26e-17 | 8 |
vagina | 1.16e-15 | 1 |
tricuspid valve | 2.75e-15 | 1 |
right atrium valve | 2.75e-15 | 1 |
outflow tract of atrium | 2.75e-15 | 1 |
outflow part of right atrium | 2.75e-15 | 1 |
right cardiac atrium | 2.75e-15 | 1 |
cranial nerve II | 3.17e-15 | 1 |
cranial nerve | 3.17e-15 | 1 |
nerve trunk | 3.17e-15 | 1 |
nerve connecting eye with brain | 3.17e-15 | 1 |
nerve | 3.17e-15 | 1 |
retinal neural layer | 3.17e-15 | 1 |
presumptive neural retina | 3.17e-15 | 1 |
lymphoid system | 1.41e-13 | 10 |
cardiac atrium | 2.67e-08 | 2 |
atrioventricular valve | 2.67e-08 | 2 |
future cardiac atrium | 2.67e-08 | 2 |
neural tissue | 2.87e-08 | 2 |
multi cell component structure | 2.87e-08 | 2 |
neuron projection bundle | 2.87e-08 | 2 |
vessel | 2.92e-07 | 68 |
immune system | 5.52e-07 | 93 |