FFCP PHASE1:Hg19::chr1:161476183..161476210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2212 | |EntrezGene=2212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3616 | |HGNC=3616 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_uc001gao.2_5end | |association_with_transcript=59bp_to_uc001gao.2_5end | ||
|cluster_id=chr1:161476183..161476210,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_5_at_FCGR2A_5end | |description=CAGE_peak_5_at_FCGR2A_5end | ||
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|ontology_enrichment_celltype=CL:0000766!3.66e-59!76;CL:0002057!3.22e-55!42;CL:0002194!2.05e-54!63;CL:0000576!2.05e-54!63;CL:0000040!2.05e-54!63;CL:0000559!2.05e-54!63;CL:0000839!4.16e-53!70;CL:0002009!3.26e-52!65;CL:0000557!4.17e-52!71;CL:0000860!1.52e-50!45;CL:0000763!2.35e-49!112;CL:0000049!2.35e-49!112;CL:0000037!8.86e-32!172;CL:0000566!8.86e-32!172;CL:0002032!1.09e-31!165;CL:0000837!1.09e-31!165;CL:0000738!5.13e-31!140;CL:0000988!9.01e-29!182;CL:0002087!9.82e-29!119;CL:0002031!1.07e-27!124;CL:0002393!5.32e-10!9;CL:0002397!5.32e-10!9 | |ontology_enrichment_celltype=CL:0000766!3.66e-59!76;CL:0002057!3.22e-55!42;CL:0002194!2.05e-54!63;CL:0000576!2.05e-54!63;CL:0000040!2.05e-54!63;CL:0000559!2.05e-54!63;CL:0000839!4.16e-53!70;CL:0002009!3.26e-52!65;CL:0000557!4.17e-52!71;CL:0000860!1.52e-50!45;CL:0000763!2.35e-49!112;CL:0000049!2.35e-49!112;CL:0000037!8.86e-32!172;CL:0000566!8.86e-32!172;CL:0002032!1.09e-31!165;CL:0000837!1.09e-31!165;CL:0000738!5.13e-31!140;CL:0000988!9.01e-29!182;CL:0002087!9.82e-29!119;CL:0002031!1.07e-27!124;CL:0002393!5.32e-10!9;CL:0002397!5.32e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-81;33!CL:0002057;1.34e-81;33!CL:0000473;1.88e-73;39!CL:0000234;1.88e-73;39!CL:0000576;4.93e-47;48!CL:0000766;6.37e-38;69!CL:0000763;1.74e-16;100!CL:0000775;7.75e-14;3!CL:0002087;1.85e-10;104!CL:0000738;2.00e-10;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.34e-81;33!CL:0002057;1.34e-81;33!CL:0000473;1.88e-73;39!CL:0000234;1.88e-73;39!CL:0000576;4.93e-47;48!CL:0000766;6.37e-38;69!CL:0000763;1.74e-16;100!CL:0000775;7.75e-14;3!CL:0002087;1.85e-10;104!CL:0000738;2.00e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.64e-88,48;CL:0000234,1.64e-88,48;CL:0000860,2.30e-84,42;CL:0002057,2.30e-84,42;CL:0002194,3.43e-69,59;CL:0000576,3.43e-69,59;CL:0000040,3.43e-69,59;CL:0000559,3.43e-69,59;CL:0000766,2.84e-67,72;CL:0002009,1.07e-66,61;CL:0000839,4.08e-61,66;CL:0000557,4.26e-60,67;CL:0000763,8.48e-45,108;CL:0000049,8.48e-45,108;CL:0002087,7.08e-32,115;CL:0000738,7.92e-32,136;CL:0002031,3.17e-30,120;CL:0002032,2.80e-27,161;CL:0000837,2.80e-27,161;CL:0000037,8.70e-26,168;CL:0000988,4.84e-24,177;CL:0000775,7.61e-14,3;CL:0000134,8.92e-08,354;CL:0002320,1.83e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-62;42!CL:0000049;1.36e-15;108 | |ontology_enrichment_development_v019=CL:0002057;1.42e-62;42!CL:0000049;1.36e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-56!102;UBERON:0003061!1.23e-56!102;UBERON:0002193!4.40e-53!112;UBERON:0002371!3.16e-44!80;UBERON:0001474!6.75e-40!86;UBERON:0002405!1.06e-32!115;UBERON:0004765!2.34e-31!101;UBERON:0001434!2.34e-31!101;UBERON:0007023!3.99e-22!115;UBERON:0003081!4.64e-17!216;UBERON:0002204!8.45e-14!167;UBERON:0000178!3.77e-11!15;UBERON:0000179!3.77e-11!15;UBERON:0000463!3.77e-11!15;UBERON:0002420!1.01e-08!9;UBERON:0007245!1.01e-08!9;UBERON:0010009!1.01e-08!9;UBERON:0010011!1.01e-08!9;UBERON:0000454!1.01e-08!9;UBERON:0002308!1.36e-08!9;UBERON:0000125!1.36e-08!9;UBERON:0001049!2.08e-07!57;UBERON:0005068!2.08e-07!57;UBERON:0006241!2.08e-07!57;UBERON:0007135!2.08e-07!57;UBERON:0002020!5.08e-07!34;UBERON:0003528!5.08e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!1.23e-56!102;UBERON:0003061!1.23e-56!102;UBERON:0002193!4.40e-53!112;UBERON:0002371!3.16e-44!80;UBERON:0001474!6.75e-40!86;UBERON:0002405!1.06e-32!115;UBERON:0004765!2.34e-31!101;UBERON:0001434!2.34e-31!101;UBERON:0007023!3.99e-22!115;UBERON:0003081!4.64e-17!216;UBERON:0002204!8.45e-14!167;UBERON:0000178!3.77e-11!15;UBERON:0000179!3.77e-11!15;UBERON:0000463!3.77e-11!15;UBERON:0002420!1.01e-08!9;UBERON:0007245!1.01e-08!9;UBERON:0010009!1.01e-08!9;UBERON:0010011!1.01e-08!9;UBERON:0000454!1.01e-08!9;UBERON:0002308!1.36e-08!9;UBERON:0000125!1.36e-08!9;UBERON:0001049!2.08e-07!57;UBERON:0005068!2.08e-07!57;UBERON:0006241!2.08e-07!57;UBERON:0007135!2.08e-07!57;UBERON:0002020!5.08e-07!34;UBERON:0003528!5.08e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-09;15!UBERON:0000179;3.07e-09;15!UBERON:0000463;3.07e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-09;15!UBERON:0000179;3.07e-09;15!UBERON:0000463;3.07e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.24e-56,98;UBERON:0003061,3.24e-56,98;UBERON:0002371,3.99e-52,76;UBERON:0002193,3.11e-50,108;UBERON:0001474,9.03e-48,82;UBERON:0004765,7.38e-43,90;UBERON:0002405,3.12e-41,93;UBERON:0001434,8.20e-38,100;UBERON:0003081,1.22e-22,203;UBERON:0002204,1.61e-19,167;UBERON:0000926,1.96e-11,315;UBERON:0004120,1.96e-11,315;UBERON:0006603,1.96e-11,315;UBERON:0000178,2.49e-09,15;UBERON:0000179,2.49e-09,15;UBERON:0000463,2.49e-09,15;UBERON:0002384,4.84e-07,371 | |||
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|short_description=p5@FCGR2A | |short_description=p5@FCGR2A | ||
}} | }} |
Latest revision as of 06:10, 18 September 2015
Short description: | p5@FCGR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FCGR2A_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 59bp_to_uc001gao.2_5end |
EntrezGene: | FCGR2A |
HGNC: | 3616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.64e-88 | 48 |
phagocyte | 1.64e-88 | 48 |
classical monocyte | 2.30e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.30e-84 | 42 |
monopoietic cell | 3.43e-69 | 59 |
monocyte | 3.43e-69 | 59 |
monoblast | 3.43e-69 | 59 |
promonocyte | 3.43e-69 | 59 |
myeloid leukocyte | 2.84e-67 | 72 |
macrophage dendritic cell progenitor | 1.07e-66 | 61 |
myeloid lineage restricted progenitor cell | 4.08e-61 | 66 |
granulocyte monocyte progenitor cell | 4.26e-60 | 67 |
myeloid cell | 8.48e-45 | 108 |
common myeloid progenitor | 8.48e-45 | 108 |
nongranular leukocyte | 7.08e-32 | 115 |
leukocyte | 7.92e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 3.17e-30 | 120 |
hematopoietic oligopotent progenitor cell | 2.80e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-27 | 161 |
hematopoietic stem cell | 8.70e-26 | 168 |
hematopoietic cell | 4.84e-24 | 177 |
neutrophil | 7.61e-14 | 3 |
mesenchymal cell | 8.92e-08 | 354 |
connective tissue cell | 1.83e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.24e-56 | 98 |
blood island | 3.24e-56 | 98 |
bone marrow | 3.99e-52 | 76 |
hemolymphoid system | 3.11e-50 | 108 |
bone element | 9.03e-48 | 82 |
skeletal element | 7.38e-43 | 90 |
immune system | 3.12e-41 | 93 |
skeletal system | 8.20e-38 | 100 |
lateral plate mesoderm | 1.22e-22 | 203 |
musculoskeletal system | 1.61e-19 | 167 |
mesoderm | 1.96e-11 | 315 |
mesoderm-derived structure | 1.96e-11 | 315 |
presumptive mesoderm | 1.96e-11 | 315 |
blood | 2.49e-09 | 15 |
haemolymphatic fluid | 2.49e-09 | 15 |
organism substance | 2.49e-09 | 15 |
connective tissue | 4.84e-07 | 371 |