FFCP PHASE1:Hg19::chr6:79315735..79315760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000449463_5end | |association_with_transcript=0bp_to_ENST00000449463_5end | ||
|cluster_id=chr6:79315735..79315760,- | |||
|coexpression_cluster_id=C328 | |coexpression_cluster_id=C328 | ||
|description=CAGE_peak_1_at_ENST00000449463_5end | |description=CAGE_peak_1_at_ENST00000449463_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.80e-27!24;CL:0000071!1.89e-20!18;CL:0002546!1.89e-20!18;CL:0000115!2.73e-17!35;CL:0002620!2.96e-16!23;CL:0002078!1.46e-15!44;CL:0000213!2.27e-15!57;CL:0000215!2.27e-15!57;CL:0000222!3.63e-14!119;CL:0000057!3.05e-13!75;CL:0000076!1.80e-12!62;CL:0000220!4.57e-12!246;CL:0002321!8.84e-12!248;CL:0000055!2.45e-11!180;CL:1000413!1.20e-10!9;CL:0005020!1.40e-08!6;CL:0002138!1.40e-08!6;CL:0005022!1.40e-08!6;CL:0002543!1.42e-08!6;CL:0002371!2.98e-08!591;CL:0000144!3.25e-08!625;CL:0002544!5.48e-08!6;CL:0000548!1.05e-07!679;CL:0000004!1.05e-07!679;CL:0000255!1.05e-07!679;CL:0000012!1.79e-07!682 | |ontology_enrichment_celltype=CL:0002139!1.80e-27!24;CL:0000071!1.89e-20!18;CL:0002546!1.89e-20!18;CL:0000115!2.73e-17!35;CL:0002620!2.96e-16!23;CL:0002078!1.46e-15!44;CL:0000213!2.27e-15!57;CL:0000215!2.27e-15!57;CL:0000222!3.63e-14!119;CL:0000057!3.05e-13!75;CL:0000076!1.80e-12!62;CL:0000220!4.57e-12!246;CL:0002321!8.84e-12!248;CL:0000055!2.45e-11!180;CL:1000413!1.20e-10!9;CL:0005020!1.40e-08!6;CL:0002138!1.40e-08!6;CL:0005022!1.40e-08!6;CL:0002543!1.42e-08!6;CL:0002371!2.98e-08!591;CL:0000144!3.25e-08!625;CL:0002544!5.48e-08!6;CL:0000548!1.05e-07!679;CL:0000004!1.05e-07!679;CL:0000255!1.05e-07!679;CL:0000012!1.79e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.52e-46;24!CL:0000071;5.07e-30;18!CL:0000115;2.69e-25;36!CL:0002138;8.01e-19;6!CL:0002543;1.52e-18;6!CL:1000413;2.86e-15;9!CL:0002078;4.79e-15;45!CL:0000213;1.22e-14;58!CL:0000215;1.22e-14;58!CL:0002544;2.08e-12;6!CL:0000076;3.80e-12;63!CL:0002618;1.13e-10;3!CL:0002620;5.96e-09;23 | |ontology_enrichment_celltype_v019=CL:0002139;1.52e-46;24!CL:0000071;5.07e-30;18!CL:0000115;2.69e-25;36!CL:0002138;8.01e-19;6!CL:0002543;1.52e-18;6!CL:1000413;2.86e-15;9!CL:0002078;4.79e-15;45!CL:0000213;1.22e-14;58!CL:0000215;1.22e-14;58!CL:0002544;2.08e-12;6!CL:0000076;3.80e-12;63!CL:0002618;1.13e-10;3!CL:0002620;5.96e-09;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-46,24;CL:0000071,3.06e-30,18;CL:0002546,3.06e-30,18;CL:0000115,2.72e-29,36;CL:0000213,1.55e-26,58;CL:0000215,1.55e-26,58;CL:0002078,9.34e-25,45;CL:0005020,9.76e-19,6;CL:0002138,9.76e-19,6;CL:0005022,9.76e-19,6;CL:0002543,1.01e-18,6;CL:0000076,1.23e-17,63;CL:1000413,2.08e-15,9;CL:0000222,1.49e-13,121;CL:0002544,1.47e-12,6;CL:0002618,1.10e-10,3;CL:0000066,2.13e-09,253;CL:0002620,3.69e-09,23;CL:0002321,7.80e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.07e-30;18!CL:0005022;8.01e-19;6 | |ontology_enrichment_development_v019=CL:0002546;5.07e-30;18!CL:0005022;8.01e-19;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;5.07e-30;18!UBERON:0001986;5.07e-30;18!UBERON:0004852;5.07e-30;18!UBERON:0000487;6.41e-24;22!UBERON:0006914;1.25e-20;25!UBERON:0003915;2.86e-15;9!UBERON:0004700;2.86e-15;9!UBERON:0001917;2.86e-15;9!UBERON:0000490;3.25e-15;33!UBERON:0001473;6.31e-14;8!UBERON:0004536;6.31e-14;8!UBERON:0006558;6.31e-14;8!UBERON:0001638;4.11e-12;9!UBERON:0003920;4.11e-12;9!UBERON:0004582;4.11e-12;9!UBERON:0002465;5.50e-11;10!UBERON:0000055;1.08e-09;65!UBERON:0002049;4.76e-09;75!UBERON:0007798;4.76e-09;75!UBERON:0007500;5.35e-07;56!UBERON:0001981;5.35e-07;56!UBERON:0004537;5.35e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0004638;5.07e-30;18!UBERON:0001986;5.07e-30;18!UBERON:0004852;5.07e-30;18!UBERON:0000487;6.41e-24;22!UBERON:0006914;1.25e-20;25!UBERON:0003915;2.86e-15;9!UBERON:0004700;2.86e-15;9!UBERON:0001917;2.86e-15;9!UBERON:0000490;3.25e-15;33!UBERON:0001473;6.31e-14;8!UBERON:0004536;6.31e-14;8!UBERON:0006558;6.31e-14;8!UBERON:0001638;4.11e-12;9!UBERON:0003920;4.11e-12;9!UBERON:0004582;4.11e-12;9!UBERON:0002465;5.50e-11;10!UBERON:0000055;1.08e-09;65!UBERON:0002049;4.76e-09;75!UBERON:0007798;4.76e-09;75!UBERON:0007500;5.35e-07;56!UBERON:0001981;5.35e-07;56!UBERON:0004537;5.35e-07;56 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.06e-30,18;UBERON:0001986,3.06e-30,18;UBERON:0004852,3.06e-30,18;UBERON:0000487,4.27e-24,22;UBERON:0006914,8.79e-21,25;UBERON:0002049,5.69e-18,78;UBERON:0007798,5.69e-18,78;UBERON:0003915,2.08e-15,9;UBERON:0004700,2.08e-15,9;UBERON:0001917,2.08e-15,9;UBERON:0000055,1.51e-14,68;UBERON:0001473,7.29e-14,8;UBERON:0004536,7.29e-14,8;UBERON:0006558,7.29e-14,8;UBERON:0001638,3.14e-12,9;UBERON:0003920,3.14e-12,9;UBERON:0004582,3.14e-12,9;UBERON:0004535,4.83e-11,109;UBERON:0002465,6.16e-11,10;UBERON:0001009,1.40e-10,112;UBERON:0007500,4.48e-08,59;UBERON:0001981,4.48e-08,59;UBERON:0004537,4.48e-08,59;UBERON:0006965,4.48e-08,59 | |||
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| ||
|short_description=p1@ENST00000449463 | |short_description=p1@ENST00000449463 | ||
}} | }} |
Latest revision as of 03:21, 31 July 2015
Short description: | p1@ENST00000449463 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449463_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_ENST00000449463_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-46 | 24 |
blood vessel endothelial cell | 3.06e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.06e-30 | 18 |
endothelial cell | 2.72e-29 | 36 |
lining cell | 1.55e-26 | 58 |
barrier cell | 1.55e-26 | 58 |
meso-epithelial cell | 9.34e-25 | 45 |
lymphangioblast | 9.76e-19 | 6 |
endothelial cell of lymphatic vessel | 9.76e-19 | 6 |
vascular lymphangioblast | 9.76e-19 | 6 |
vein endothelial cell | 1.01e-18 | 6 |
squamous epithelial cell | 1.23e-17 | 63 |
endothelial cell of artery | 2.08e-15 | 9 |
mesodermal cell | 1.49e-13 | 121 |
aortic endothelial cell | 1.47e-12 | 6 |
endothelial cell of umbilical vein | 1.10e-10 | 3 |
epithelial cell | 2.13e-09 | 253 |
skin fibroblast | 3.69e-09 | 23 |
embryonic cell | 7.80e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.06e-30 | 18 |
endothelium | 3.06e-30 | 18 |
cardiovascular system endothelium | 3.06e-30 | 18 |
simple squamous epithelium | 4.27e-24 | 22 |
squamous epithelium | 8.79e-21 | 25 |
vasculature | 5.69e-18 | 78 |
vascular system | 5.69e-18 | 78 |
endothelial tube | 2.08e-15 | 9 |
arterial system endothelium | 2.08e-15 | 9 |
endothelium of artery | 2.08e-15 | 9 |
vessel | 1.51e-14 | 68 |
lymphatic vessel | 7.29e-14 | 8 |
lymph vasculature | 7.29e-14 | 8 |
lymphatic part of lymphoid system | 7.29e-14 | 8 |
vein | 3.14e-12 | 9 |
venous blood vessel | 3.14e-12 | 9 |
venous system | 3.14e-12 | 9 |
cardiovascular system | 4.83e-11 | 109 |
lymphoid system | 6.16e-11 | 10 |
circulatory system | 1.40e-10 | 112 |
epithelial tube open at both ends | 4.48e-08 | 59 |
blood vessel | 4.48e-08 | 59 |
blood vasculature | 4.48e-08 | 59 |
vascular cord | 4.48e-08 | 59 |