FFCP PHASE1:Hg19::chr1:163039143..163039159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5999 | |EntrezGene=5999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10000 | |HGNC=10000 | ||
|TSSclassifier=strong | |||
|UniProt=B1APZ3,A7YVV7,E9PR32 | |UniProt=B1APZ3,A7YVV7,E9PR32 | ||
|association_with_transcript=0bp_to_ENST00000367908,ENST00000491263,ENST00000527809,ENST00000531057_5end | |association_with_transcript=0bp_to_ENST00000367908,ENST00000491263,ENST00000527809,ENST00000531057_5end | ||
|cluster_id=chr1:163039143..163039159,+ | |||
|coexpression_cluster_id=C3897 | |coexpression_cluster_id=C3897 | ||
|description=CAGE_peak_1_at_RGS4_5end | |description=CAGE_peak_1_at_RGS4_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.53e-28!180;CL:0000222!3.56e-22!119;CL:0000680!8.86e-20!57;CL:0000056!8.86e-20!57;CL:0000355!8.86e-20!57;CL:0000183!5.34e-19!59;CL:0000187!1.16e-18!54;CL:0000359!5.98e-18!32;CL:0000192!1.35e-17!42;CL:0000514!1.35e-17!42;CL:0000393!5.00e-17!60;CL:0000211!5.00e-17!60;CL:0000057!8.75e-14!75;CL:0000220!8.49e-09!246;CL:0002321!1.42e-08!248;CL:0002494!1.80e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.53e-28!180;CL:0000222!3.56e-22!119;CL:0000680!8.86e-20!57;CL:0000056!8.86e-20!57;CL:0000355!8.86e-20!57;CL:0000183!5.34e-19!59;CL:0000187!1.16e-18!54;CL:0000359!5.98e-18!32;CL:0000192!1.35e-17!42;CL:0000514!1.35e-17!42;CL:0000393!5.00e-17!60;CL:0000211!5.00e-17!60;CL:0000057!8.75e-14!75;CL:0000220!8.49e-09!246;CL:0002321!1.42e-08!248;CL:0002494!1.80e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.24e-17;32!CL:0000192;5.28e-13;43!CL:0000187;1.50e-10;55!CL:0000393;1.06e-08;61!CL:0000211;1.06e-08;61!CL:0002494;9.97e-08;16!CL:0002539;6.50e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;1.24e-17;32!CL:0000192;5.28e-13;43!CL:0000187;1.50e-10;55!CL:0000393;1.06e-08;61!CL:0000211;1.06e-08;61!CL:0002494;9.97e-08;16!CL:0002539;6.50e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.17e-22,121;CL:0000680,5.91e-20,58;CL:0000056,5.91e-20,58;CL:0000355,5.91e-20,58;CL:0000187,8.60e-19,55;CL:0000359,1.13e-18,32;CL:0000192,1.38e-17,43;CL:0000514,1.38e-17,43;CL:0000393,1.50e-16,61;CL:0000211,1.50e-16,61;CL:0000057,2.92e-14,76;CL:0002494,9.88e-08,16;CL:0002321,5.28e-07,250;CL:0002539,6.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.28e-13;43!CL:0000355;1.37e-10;58 | |ontology_enrichment_development_v019=CL:0000514;5.28e-13;43!CL:0000355;1.37e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!4.79e-07!14 | |ontology_enrichment_disease=DOID:2394!4.79e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.18e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;2.18e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.85e-27!79;UBERON:0007798!3.85e-27!79;UBERON:0000119!6.49e-26!312;UBERON:0004872!1.99e-25!84;UBERON:0000483!9.29e-25!309;UBERON:0000025!1.10e-24!194;UBERON:0001981!5.57e-24!60;UBERON:0007500!5.57e-24!60;UBERON:0004537!5.57e-24!60;UBERON:0006965!5.57e-24!60;UBERON:0000055!4.52e-23!69;UBERON:0001637!6.66e-23!42;UBERON:0003509!6.66e-23!42;UBERON:0004572!6.66e-23!42;UBERON:0000475!1.62e-22!365;UBERON:0004111!2.41e-21!241;UBERON:0000477!7.65e-21!286;UBERON:0004535!2.70e-20!110;UBERON:0001009!9.76e-20!113;UBERON:0000914!1.12e-19!83;UBERON:0002329!1.12e-19!83;UBERON:0003077!1.12e-19!83;UBERON:0003059!1.12e-19!83;UBERON:0007282!1.12e-19!83;UBERON:0009618!1.12e-19!83;UBERON:0007285!1.12e-19!83;UBERON:0004290!6.44e-19!70;UBERON:0001134!1.52e-18!61;UBERON:0002036!1.52e-18!61;UBERON:0003082!1.52e-18!61;UBERON:0000481!3.13e-18!347;UBERON:0002385!3.78e-18!63;UBERON:0001015!3.78e-18!63;UBERON:0000383!3.78e-18!63;UBERON:0003914!4.44e-18!118;UBERON:0004573!6.72e-18!33;UBERON:0004571!6.72e-18!33;UBERON:0000468!7.02e-15!659;UBERON:0003075!8.70e-15!86;UBERON:0007284!8.70e-15!86;UBERON:0000490!9.53e-15!138;UBERON:0000073!1.84e-14!94;UBERON:0001016!1.84e-14!94;UBERON:0002346!2.54e-14!90;UBERON:0002616!3.92e-14!59;UBERON:0005743!8.01e-14!86;UBERON:0000955!1.90e-13!69;UBERON:0006238!1.90e-13!69;UBERON:0005256!2.19e-13!143;UBERON:0001017!4.21e-13!82;UBERON:0000486!6.43e-13!82;UBERON:0000467!2.66e-12!625;UBERON:0001049!2.84e-12!57;UBERON:0005068!2.84e-12!57;UBERON:0006241!2.84e-12!57;UBERON:0007135!2.84e-12!57;UBERON:0003056!3.96e-12!61;UBERON:0000480!4.58e-12!626;UBERON:0002780!9.79e-12!41;UBERON:0001890!9.79e-12!41;UBERON:0006240!9.79e-12!41;UBERON:0000033!1.37e-11!123;UBERON:0001869!1.68e-11!32;UBERON:0003080!1.78e-11!42;UBERON:0001893!2.77e-11!34;UBERON:0000947!3.55e-11!21;UBERON:0010191!3.55e-11!21;UBERON:0002020!4.73e-11!34;UBERON:0003528!4.73e-11!34;UBERON:0002791!1.03e-10!33;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0002619!6.65e-10!22;UBERON:0004121!9.16e-10!169;UBERON:0000924!1.19e-09!173;UBERON:0006601!1.19e-09!173;UBERON:0001950!1.67e-09!20;UBERON:0000956!1.96e-09!25;UBERON:0000203!1.96e-09!25;UBERON:0000922!2.67e-09!612;UBERON:0002050!4.28e-09!605;UBERON:0005423!4.28e-09!605;UBERON:0000923!6.54e-09!604;UBERON:0005291!6.54e-09!604;UBERON:0006598!6.54e-09!604;UBERON:0002532!6.54e-09!604;UBERON:0002100!6.67e-09!216;UBERON:0000948!4.24e-08!24;UBERON:0005498!4.24e-08!24;UBERON:0004140!4.24e-08!24;UBERON:0009881!4.24e-08!24;UBERON:0004141!4.24e-08!24;UBERON:0003084!4.24e-08!24;UBERON:0007005!4.24e-08!24;UBERON:0004139!4.24e-08!24;UBERON:0004291!4.24e-08!24;UBERON:0007100!3.00e-07!27 | 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| ||
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| ||
|short_description=p1@RGS4 | |short_description=p1@RGS4 | ||
}} | }} |
Latest revision as of 07:53, 18 September 2015
Short description: | p1@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS4_5end |
Coexpression cluster: | C3897_Mesothelial_Multipotent_mesenchymal_Fibroblast_argyrophil_medial_leiomyoma |
Association with transcript: | 0bp_to_ENST00000367908, ENST00000491263, ENST00000527809, ENST00000531057_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | B1APZ3A7YVV7E9PR32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.17e-22 | 121 |
muscle precursor cell | 5.91e-20 | 58 |
myoblast | 5.91e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-20 | 58 |
muscle cell | 8.60e-19 | 55 |
vascular associated smooth muscle cell | 1.13e-18 | 32 |
smooth muscle cell | 1.38e-17 | 43 |
smooth muscle myoblast | 1.38e-17 | 43 |
electrically responsive cell | 1.50e-16 | 61 |
electrically active cell | 1.50e-16 | 61 |
fibroblast | 2.92e-14 | 76 |
cardiocyte | 9.88e-08 | 16 |
embryonic cell | 5.28e-07 | 250 |
aortic smooth muscle cell | 6.55e-07 | 10 |
Ontology term | p-value | n |
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