FFCP PHASE1:Hg19::chr6:56765738..56765745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56765738..56765745,- | |||
|coexpression_cluster_id=C391 | |coexpression_cluster_id=C391 | ||
|description=CAGE_peak_at_chr6:56765738..56765745,- | |description=CAGE_peak_at_chr6:56765738..56765745,- | ||
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|ontology_enrichment_celltype=CL:0000062!3.03e-08!11;CL:0000375!3.03e-08!11;CL:0000335!3.03e-08!11;CL:0000322!6.34e-08!3;CL:0000064!8.29e-08!3;CL:0005012!8.29e-08!3;CL:0000067!8.29e-08!3;CL:0002304!8.29e-08!3 | |ontology_enrichment_celltype=CL:0000062!3.03e-08!11;CL:0000375!3.03e-08!11;CL:0000335!3.03e-08!11;CL:0000322!6.34e-08!3;CL:0000064!8.29e-08!3;CL:0005012!8.29e-08!3;CL:0000067!8.29e-08!3;CL:0002304!8.29e-08!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.15e-21;5 | |ontology_enrichment_development_v019=UBERON:0007123;5.15e-21;5 | ||
|ontology_enrichment_disease=DOID:3112!1.88e-21!1;DOID:3908!5.45e-17!5;DOID:3910!3.02e-11!2;DOID:3905!7.08e-10!9;DOID:4556!4.52e-08!3 | |ontology_enrichment_disease=DOID:3112!1.88e-21!1;DOID:3908!5.45e-17!5;DOID:3910!3.02e-11!2;DOID:3905!7.08e-10!9;DOID:4556!4.52e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:3112;2.55e-98;1!DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |ontology_enrichment_disease_v019=DOID:3112;2.55e-98;1!DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,2.55e-98,1;DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004903!3.02e-11!2;UBERON:0002173!3.02e-11!2;UBERON:0002186!3.02e-11!2;UBERON:0004821!6.34e-08!3;UBERON:0003215!6.34e-08!3;UBERON:0002299!6.34e-08!3;UBERON:0006524!6.34e-08!3;UBERON:0008874!6.34e-08!3;UBERON:0002169!6.34e-08!3;UBERON:0004894!6.34e-08!3;UBERON:0001778!8.29e-08!3;UBERON:0001775!8.29e-08!3 | |ontology_enrichment_uberon=UBERON:0004903!3.02e-11!2;UBERON:0002173!3.02e-11!2;UBERON:0002186!3.02e-11!2;UBERON:0004821!6.34e-08!3;UBERON:0003215!6.34e-08!3;UBERON:0002299!6.34e-08!3;UBERON:0006524!6.34e-08!3;UBERON:0008874!6.34e-08!3;UBERON:0002169!6.34e-08!3;UBERON:0004894!6.34e-08!3;UBERON:0001778!8.29e-08!3;UBERON:0001775!8.29e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.15e-21;5 | |ontology_enrichment_uberon_v019=UBERON:0002046;5.15e-21;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.15e-21,5;UBERON:0004117,5.15e-21,5;UBERON:0007689,5.15e-21,5;UBERON:0007123,5.15e-21,5;UBERON:0003091,5.15e-21,5;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chr6:56765738..56765745,- | |short_description=p@chr6:56765738..56765745,- | ||
}} | }} |
Latest revision as of 02:34, 31 July 2015
Short description: | p@chr6:56765738..56765745, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56765738..56765745, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 5.15e-21 | 5 |
pharyngeal pouch | 5.15e-21 | 5 |
thyroid diverticulum | 5.15e-21 | 5 |
pharyngeal pouch 2 | 5.15e-21 | 5 |
thyroid primordium | 5.15e-21 | 5 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.55e-98 | 1 |
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |