FFCP PHASE1:Hg19::chr20:5637898..5637899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5637898..5637899,- | |||
|description=CAGE_peak_at_chr20:5637898..5637899,- | |description=CAGE_peak_at_chr20:5637898..5637899,- | ||
|id=chr20:5637898..5637899,- | |id=chr20:5637898..5637899,- | ||
|ontology_enrichment_celltype=CL:0000066!4.61e-10!254 | |ontology_enrichment_celltype=CL:0000066!4.61e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0000307;8.03e-18;3!CL:0000306;1.38e-13;4!CL:0002222;1.38e-13;4!CL:0002224;1.38e-13;4!CL:0002202;3.58e-13;9!CL:0002632;3.58e-13;9!CL:0002368;2.71e-09;13 | |ontology_enrichment_celltype_v019=CL:0000307;8.03e-18;3!CL:0000306;1.38e-13;4!CL:0002222;1.38e-13;4!CL:0002224;1.38e-13;4!CL:0002202;3.58e-13;9!CL:0002632;3.58e-13;9!CL:0002368;2.71e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.40e-18,3;CL:0000069,8.40e-18,3;CL:0000307,8.40e-18,3;CL:0000377,8.40e-18,3;CL:0000306,1.26e-13,4;CL:0002222,1.26e-13,4;CL:0002224,1.26e-13,4;CL:0002202,4.60e-13,9;CL:0002632,4.60e-13,9;CL:0002368,3.22e-09,13 | |||
|ontology_enrichment_development_v019=CL:0000377;8.03e-18;3!UBERON:0007123;6.79e-11;5 | |ontology_enrichment_development_v019=CL:0000377;8.03e-18;3!UBERON:0007123;6.79e-11;5 | ||
|ontology_enrichment_disease=DOID:162!2.52e-08!235;DOID:14566!2.64e-08!239 | |ontology_enrichment_disease=DOID:162!2.52e-08!235;DOID:14566!2.64e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:3112;9.12e-14;1 | |ontology_enrichment_disease_v019=DOID:3112;9.12e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,1.42e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000076!1.97e-07!8 | |ontology_enrichment_uberon=UBERON:0000076!1.97e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.38e-13;4!UBERON:0005389;1.38e-13;4!UBERON:0000484;1.38e-13;4!UBERON:0000965;1.38e-13;4!UBERON:0001803;1.38e-13;4!UBERON:0002046;6.79e-11;5!UBERON:0003126;3.63e-08;7!UBERON:0001005;3.63e-08;7!UBERON:0007196;4.02e-08;15!UBERON:0001558;4.02e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.38e-13;4!UBERON:0005389;1.38e-13;4!UBERON:0000484;1.38e-13;4!UBERON:0000965;1.38e-13;4!UBERON:0001803;1.38e-13;4!UBERON:0002046;6.79e-11;5!UBERON:0003126;3.63e-08;7!UBERON:0001005;3.63e-08;7!UBERON:0007196;4.02e-08;15!UBERON:0001558;4.02e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.26e-13,4;UBERON:0005389,1.26e-13,4;UBERON:0000484,1.26e-13,4;UBERON:0002546,1.26e-13,4;UBERON:0000965,1.26e-13,4;UBERON:0001803,1.26e-13,4;UBERON:0003073,1.26e-13,4;UBERON:0005426,1.26e-13,4;UBERON:0002046,1.01e-10,5;UBERON:0004117,1.01e-10,5;UBERON:0007689,1.01e-10,5;UBERON:0007123,1.01e-10,5;UBERON:0003091,1.01e-10,5;UBERON:0003126,3.70e-08,7;UBERON:0001005,3.70e-08,7;UBERON:0007196,4.65e-08,15;UBERON:0001558,4.65e-08,15;UBERON:0000076,2.95e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464841513839837,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.699869440489966,0.0962221127255121,1.34060455107157,3.26672954583968,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0.853828638089378,0,0,0,0.69647365264322,0,0,0,0,0.164230914106418,0,0,0,1.37041924646751,0,0,0,0,0,0.39961921916426,0,0.114536596165916,0,0.14405479798815,0.248505071130865,0.471388069233591,0.543616824294456,0.523014231561666,0.305994652908965,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,1.62474530350739,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0,0.576169937778896,0,0,0,0.236387681767936,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464841513839837,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.699869440489966,0.0962221127255121,1.34060455107157,3.26672954583968,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0.853828638089378,0,0,0,0.69647365264322,0,0,0,0,0.164230914106418,0,0,0,1.37041924646751,0,0,0,0,0,0.39961921916426,0,0.114536596165916,0,0.14405479798815,0.248505071130865,0.471388069233591,0.543616824294456,0.523014231561666,0.305994652908965,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,1.62474530350739,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0,0.576169937778896,0,0,0,0.236387681767936,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr20:5637898..5637899,- | |short_description=p@chr20:5637898..5637899,- | ||
}} | }} |
Latest revision as of 15:44, 28 July 2015
Short description: | p@chr20:5637898..5637899, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5637898..5637899, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.40e-18 | 3 |
branched duct epithelial cell | 8.40e-18 | 3 |
tracheal epithelial cell | 8.40e-18 | 3 |
tracheoblast | 8.40e-18 | 3 |
crystallin accumulating cell | 1.26e-13 | 4 |
vertebrate lens cell | 1.26e-13 | 4 |
lens epithelial cell | 1.26e-13 | 4 |
epithelial cell of tracheobronchial tree | 4.60e-13 | 9 |
epithelial cell of lower respiratory tract | 4.60e-13 | 9 |
respiratory epithelial cell | 3.22e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.26e-13 | 4 |
transparent eye structure | 1.26e-13 | 4 |
simple cuboidal epithelium | 1.26e-13 | 4 |
cranial placode | 1.26e-13 | 4 |
lens of camera-type eye | 1.26e-13 | 4 |
epithelium of lens | 1.26e-13 | 4 |
lens placode | 1.26e-13 | 4 |
lens vesicle | 1.26e-13 | 4 |
thyroid gland | 1.01e-10 | 5 |
pharyngeal pouch | 1.01e-10 | 5 |
thyroid diverticulum | 1.01e-10 | 5 |
pharyngeal pouch 2 | 1.01e-10 | 5 |
thyroid primordium | 1.01e-10 | 5 |
trachea | 3.70e-08 | 7 |
respiratory airway | 3.70e-08 | 7 |
tracheobronchial tree | 4.65e-08 | 15 |
lower respiratory tract | 4.65e-08 | 15 |
external ectoderm | 2.95e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.42e-13 | 1 |