FFCP PHASE1:Hg19::chr1:87794863..87794896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8543 | |EntrezGene=8543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6644 | |HGNC=6644 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_ENST00000495705_5end | |association_with_transcript=81bp_to_ENST00000495705_5end | ||
|cluster_id=chr1:87794863..87794896,+ | |||
|description=CAGE_peak_7_at_LMO4_5end | |description=CAGE_peak_7_at_LMO4_5end | ||
|id=chr1:87794863..87794896,+ | |id=chr1:87794863..87794896,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.45e-09;13!CL:0000540;7.30e-07;6!CL:0000404;7.30e-07;6 | |ontology_enrichment_celltype_v019=CL:0000136;1.45e-09;13!CL:0000540;7.30e-07;6!CL:0000404;7.30e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.17e-09,8;CL:0000136,1.92e-09,15;CL:0000540,1.02e-07,6;CL:0000031,1.02e-07,6;CL:0000404,1.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;7.30e-07;6 | |ontology_enrichment_development_v019=CL:0000031;7.30e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.61e-08;6!UBERON:0002358;1.61e-08;6!UBERON:0003684;1.61e-08;6!UBERON:0001178;1.61e-08;6!UBERON:0004457;3.46e-07;9!UBERON:0000042;3.46e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.61e-08;6!UBERON:0002358;1.61e-08;6!UBERON:0003684;1.61e-08;6!UBERON:0001178;1.61e-08;6!UBERON:0004457;3.46e-07;9!UBERON:0000042;3.46e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.77e-08,6;UBERON:0002358,3.77e-08,6;UBERON:0003684,3.77e-08,6;UBERON:0001178,3.77e-08,6 | |||
|phase1_expression=3.63356758541113,2.5692062866918,4.51054093107108,1.0007329835313,5.81049422755474,1.74467704820074,5.06599756336621,15.1612769622439,9.14149698699435,0,0,0,0.527533956456907,0.990130823680373,0.994192127183747,0,0.602694528023977,0,0.975865597581014,0.61560529038394,0.204000691244253,0,1.43117993565528,0.684372125364421,0.627713197974014,0.458480434487708,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0,0,0,0,0.671746422719773,0.647787332037959,0,0.726991193897824,0,0.727752183563449,0,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.752969358170419,1.09162460023138,0.674170453335254,0.306083892370903,1.28371610830437,1.27867425159808,1.64925650093358,1.39624560335142,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0.419317291016752,0,0.150176892841506,0.32145117339416,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,1.00269411196656,0,0,0,0.512365278902701,0.260118695119756,0.328875809207352,0.552700035571697,1.15921234294021,0,0,0,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,2.43806866313962,0.670700859703636,0.255725123687061,4.69870898099936,5.0133791063589,9.41502373245354,4.7717156823066,0.973269740605272,0.378139268656271,0.221729397462564,0.527008714158756,0.261958150995425,0.728590576585084,0.370784442784429,0.324547393654683,0.174129737299267,0.531831842075461,0.476981248610684,0,0.371457501329565,0.39752481473341,1.72046919021225,0.694281003215189,0,0.419499436209906,0.550236083880135,0.417989933073621,0.516833518338658,0.71153252537342,0,1.20848795132744,0.760272105718513,0.732186172644509,0.367663080345869,0,0.892997282840798,0.44905874525234,0.225222960966644,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.993943903390637,2.27934920996244,0.397227542439656,1.43418310374407,1.06400514659507,0.560677600142307,1.06748995729705,0.74000264525148,0.933633106199299,0.942974704487816,0.653847612453835,0.605429710579726,0,0.468642863667593,1.24864030732128,0,0.896692083310806,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.413303124703062,0,0.989067717114227,0.910161361938026,0,0,0.500474079487857,0,1.31693286264251,0.612975591598039,0.751190294532984,0.567160915800105,0.179389635688862,1.49490172172997,0.211931901159562,0,0.412210116953756,0.515281080091258,1.30281799432113,0,1.16924406193438,0,0.552299391853796,1.61646056818812,0,0.806016785821122,0.67824236924195,0.57978255948989,0,0,0.975789649036763,0.397589304964456,0.348581828608555,0.725627385107593,0.756962552626885,0,3.12899064659632,1.28648187638577,0,0,0,0.473227200159376,0.168584690078102,0,0.110293972732394,0.217879444092406,0.474541238222193,0.539325232640658,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.927443239800615,0.352226082707465,0.288732895522148,0,0.380508304469197,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0.283550194484773,0.179117045405697,0,0.383382679165211,0,1.40877494421162,8.29312462163088,8.93543711185161,8.58448547299384,0.190493682876507,3.4378958300245,5.86087236050235,0,0.411309970813294,0.600686115687835,0.571652865261156,0.560655421726804,0,0.1466765716419,0.387815147273333,0,0,2.39344304926383,1.04007436911366,0.514414748524284,0,0.532844358032199,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,5.12446941001296,0,4.09889263846434,0,1.00451418286425,0,1.19812427745791,1.14861935834114,0,0.289562613335158,0.205476322550383,0.358121926479791,0.448340575974109,0.591092280605782,0.646882724578552,0.128343036279748,2.28685161800217,1.30139853857622,1.54657762555539,1.67516265334349,2.55175500661265,0,0,0,0.12269149171914,1.50051156317903,0.542530047399471,0.415941723061614,0.535286966391485,0.315404830067869,0.468565659970853,1.80567659836631,20.4666753650386,0,0.664225598535437,0.368738337083406,1.39013783148933,0.783204629850962,0.686286847621712,0,0.215714200818617,0.320182673410333,0.606255142892519,0,0.907170879989041,4.46594054073798,0.153461973288062,1.68396056659844,6.40695746278505,3.07024349440022,1.28683136914886,0,0.771048469013278,4.26148140751505,2.29956036838666,0.519254429183621,2.32420756919918,1.0877350463246,0,0.920809889358963,0.918515585316854,0.728364672026868,0.917870904715969,0,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.656029291399411,1.62689197332152,1.23649213977267,0.366277859273374,0.495056999523528,0,0.650060246036521,9.64103579064957,4.15684088656124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| ||
|short_description=p7@LMO4 | |short_description=p7@LMO4 | ||
}} | }} |
Latest revision as of 15:22, 19 September 2015
Short description: | p7@LMO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LMO4_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000495705_5end |
EntrezGene: | LMO4 |
HGNC: | 6644 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.17e-09 | 8 |
fat cell | 1.92e-09 | 15 |
neuron | 1.02e-07 | 6 |
neuroblast | 1.02e-07 | 6 |
electrically signaling cell | 1.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.77e-08 | 6 |
peritoneum | 3.77e-08 | 6 |
abdominal cavity | 3.77e-08 | 6 |
visceral peritoneum | 3.77e-08 | 6 |