FFCP PHASE1:Hg19::chrX:48326632..48326645,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNK4 | |UniProt=C9JNK4 | ||
|association_with_transcript=52bp_to_ENST00000440085_5end | |association_with_transcript=52bp_to_ENST00000440085_5end | ||
|cluster_id=chrX:48326632..48326645,- | |||
|coexpression_cluster_id=C2189 | |coexpression_cluster_id=C2189 | ||
|description=CAGE_peak_19_at_SLC38A5_5end | |description=CAGE_peak_19_at_SLC38A5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.61e-09;1!CL:0002625;1.61e-09;1!CL:0000216;1.61e-09;1 | |ontology_enrichment_celltype_v019=CL:0000511;1.61e-09;1!CL:0002625;1.61e-09;1!CL:0000216;1.61e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.15e-09,1;CL:0002625,1.15e-09,1;CL:0000216,1.15e-09,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4235;1.61e-09;1!DOID:171;4.37e-08;10 | |ontology_enrichment_disease_v019=DOID:4235;1.61e-09;1!DOID:171;4.37e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:4235,2.67e-09,1;DOID:171,4.76e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.61e-09;1!UBERON:0001343;1.61e-09;1!UBERON:0004910;1.61e-09;1!UBERON:0004813;1.61e-09;1!UBERON:0002346;4.05e-09;4!UBERON:0000923;4.05e-09;4!UBERON:0010316;4.05e-09;4!UBERON:0005291;4.05e-09;4!UBERON:0000178;4.21e-09;15!UBERON:0000179;4.21e-09;15!UBERON:0000463;4.21e-09;15!UBERON:0002050;1.83e-07;5!UBERON:0005423;1.83e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001136;1.61e-09;1!UBERON:0001343;1.61e-09;1!UBERON:0004910;1.61e-09;1!UBERON:0004813;1.61e-09;1!UBERON:0002346;4.05e-09;4!UBERON:0000923;4.05e-09;4!UBERON:0010316;4.05e-09;4!UBERON:0005291;4.05e-09;4!UBERON:0000178;4.21e-09;15!UBERON:0000179;4.21e-09;15!UBERON:0000463;4.21e-09;15!UBERON:0002050;1.83e-07;5!UBERON:0005423;1.83e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.15e-09,1;UBERON:0001343,1.15e-09,1;UBERON:0004910,1.15e-09,1;UBERON:0005154,1.15e-09,1;UBERON:0005295,1.15e-09,1;UBERON:0004813,1.15e-09,1;UBERON:0005297,1.15e-09,1;UBERON:0005294,1.15e-09,1;UBERON:0010141,1.15e-09,1;UBERON:0005891,1.15e-09,1;UBERON:0000178,4.50e-09,15;UBERON:0000179,4.50e-09,15;UBERON:0000463,4.50e-09,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0.675105328965065,0.194874010322397,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.860413786167011,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.31700342490351,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,1.54657762555539,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,1.03850885836724,0,0,0.802025881213139,0.184161977871793,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0.267096106940212,0.826424576804891,0.768760269460425,0.382838137483752,0.809262246844399,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0.632758849437452,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,0,0.86101074534246,3.36942951335251,0,0.229723400206959,2.02979043692868,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,2.59389324477087,1.08006287447623,0.79312517629427,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0.392125068635479,0.167821586975843,0.75901493089674,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,11.2062394298347,0,0,0,0,0.936669811613763,0,0.597019211547496,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0,1.22061219961398,0.181848659202559,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,11.8941765312396,0,0.314531883711793,0.873677105536111,1.18812770967818,1.2754495206101,0.743614585554013,0.558644917973244,0.636008701306837,0.0788617450012534,0,0,0,0,0,0,0,0.756215088665154,0.0691572524642179,0,0,0.392590874004102,0.235939446695481,0,0.231051332300676,0,0,0.198916222116275,0,0,1.56302802246618,0,0,0,0,0,0,0,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,4.58239474024907,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0.340853619036631,0,0,0,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0.4226557275834,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,4.79985759374415,0,0.371995018166751,0,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0.675105328965065,0.194874010322397,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.860413786167011,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.31700342490351,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,1.54657762555539,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,1.03850885836724,0,0,0.802025881213139,0.184161977871793,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0.267096106940212,0.826424576804891,0.768760269460425,0.382838137483752,0.809262246844399,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0.632758849437452,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,0,0.86101074534246,3.36942951335251,0,0.229723400206959,2.02979043692868,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,2.59389324477087,1.08006287447623,0.79312517629427,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0.392125068635479,0.167821586975843,0.75901493089674,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,11.2062394298347,0,0,0,0,0.936669811613763,0,0.597019211547496,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0,1.22061219961398,0.181848659202559,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,11.8941765312396,0,0.314531883711793,0.873677105536111,1.18812770967818,1.2754495206101,0.743614585554013,0.558644917973244,0.636008701306837,0.0788617450012534,0,0,0,0,0,0,0,0.756215088665154,0.0691572524642179,0,0,0.392590874004102,0.235939446695481,0,0.231051332300676,0,0,0.198916222116275,0,0,1.56302802246618,0,0,0,0,0,0,0,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,4.58239474024907,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0.340853619036631,0,0,0,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0.4226557275834,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,4.79985759374415,0,0.371995018166751,0,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p19@SLC38A5 | |short_description=p19@SLC38A5 | ||
}} | }} |
Latest revision as of 18:11, 15 September 2015
Short description: | p19@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SLC38A5_5end |
Coexpression cluster: | C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute |
Association with transcript: | 52bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.15e-09 | 1 |
seminiferous tubule epithelial cell | 1.15e-09 | 1 |
Sertoli cell | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.15e-09 | 1 |
seminiferous tubule of testis | 1.15e-09 | 1 |
epithelium of male gonad | 1.15e-09 | 1 |
epithelial cord | 1.15e-09 | 1 |
sex cord | 1.15e-09 | 1 |
seminiferous tubule epithelium | 1.15e-09 | 1 |
testis sex cord | 1.15e-09 | 1 |
genital ridge | 1.15e-09 | 1 |
primitive sex cord of indifferent gonad | 1.15e-09 | 1 |
coelomic epithelium | 1.15e-09 | 1 |
blood | 4.50e-09 | 15 |
haemolymphatic fluid | 4.50e-09 | 15 |
organism substance | 4.50e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.67e-09 | 1 |
neuroectodermal tumor | 4.76e-08 | 10 |