FFCP PHASE1:Hg19::chr14:23006547..23006583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12095 | |HGNC=12095 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390530,uc010tmy.1_5end | |association_with_transcript=0bp_to_ENST00000390530,uc010tmy.1_5end | ||
|cluster_id=chr14:23006547..23006583,+ | |||
|coexpression_cluster_id=C388 | |coexpression_cluster_id=C388 | ||
|description=CAGE_peak_1_at_TRAJ7_5end | |description=CAGE_peak_1_at_TRAJ7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!8.33e-26!18;CL:0000789!8.33e-26!18;CL:0002420!8.33e-26!18;CL:0002419!8.33e-26!18;CL:0000790!8.33e-26!18;CL:0000625!6.14e-20!11;CL:0000084!8.37e-18!25;CL:0000827!8.37e-18!25;CL:0000838!5.52e-15!52;CL:0000542!1.27e-14!53;CL:0000051!1.27e-14!53;CL:0000842!1.32e-10!3;CL:0002087!2.44e-10!119;CL:0000624!2.92e-09!6;CL:0000738!7.64e-09!140;CL:0000815!3.93e-08!2;CL:0000792!3.93e-08!2;CL:0002677!3.93e-08!2;CL:0000224!4.60e-08!4;CL:0002031!5.96e-07!124;CL:0000037!6.72e-07!172;CL:0000566!6.72e-07!172 | |ontology_enrichment_celltype=CL:0000791!8.33e-26!18;CL:0000789!8.33e-26!18;CL:0002420!8.33e-26!18;CL:0002419!8.33e-26!18;CL:0000790!8.33e-26!18;CL:0000625!6.14e-20!11;CL:0000084!8.37e-18!25;CL:0000827!8.37e-18!25;CL:0000838!5.52e-15!52;CL:0000542!1.27e-14!53;CL:0000051!1.27e-14!53;CL:0000842!1.32e-10!3;CL:0002087!2.44e-10!119;CL:0000624!2.92e-09!6;CL:0000738!7.64e-09!140;CL:0000815!3.93e-08!2;CL:0000792!3.93e-08!2;CL:0002677!3.93e-08!2;CL:0000224!4.60e-08!4;CL:0002031!5.96e-07!124;CL:0000037!6.72e-07!172;CL:0000566!6.72e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.20e-28;11!CL:0000791;5.62e-17;18!CL:0000789;5.62e-17;18!CL:0002419;5.62e-17;18!CL:0000084;4.18e-12;25 | |ontology_enrichment_celltype_v019=CL:0000625;5.20e-28;11!CL:0000791;5.62e-17;18!CL:0000789;5.62e-17;18!CL:0002419;5.62e-17;18!CL:0000084;4.18e-12;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.62e-28,11;CL:0000791,7.06e-17,18;CL:0000789,7.06e-17,18;CL:0002420,7.06e-17,18;CL:0002419,7.06e-17,18;CL:0000790,7.06e-17,18;CL:0000084,4.91e-12,25;CL:0000827,4.91e-12,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.62e-17;18 | |ontology_enrichment_development_v019=CL:0000790;5.62e-17;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.42e-08!7;UBERON:0000178!1.32e-07!15;UBERON:0000179!1.32e-07!15;UBERON:0000463!1.32e-07!15 | |ontology_enrichment_uberon=UBERON:0004177!6.42e-08!7;UBERON:0000178!1.32e-07!15;UBERON:0000179!1.32e-07!15;UBERON:0000463!1.32e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TRAJ7 | |short_description=p1@TRAJ7 | ||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p1@TRAJ7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAJ7_5end |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | 0bp_to_ENST00000390530, uc010tmy.1_5end |
EntrezGene: | NA |
HGNC: | 12095 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.62e-28 | 11 |
mature alpha-beta T cell | 7.06e-17 | 18 |
alpha-beta T cell | 7.06e-17 | 18 |
immature T cell | 7.06e-17 | 18 |
mature T cell | 7.06e-17 | 18 |
immature alpha-beta T cell | 7.06e-17 | 18 |
T cell | 4.91e-12 | 25 |
pro-T cell | 4.91e-12 | 25 |