FFCP PHASE1:Hg19::chr6:161454984..161455010,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4216 | |EntrezGene=4216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6856 | |HGNC=6856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-379bp_to_ENST00000446500_5end | |association_with_transcript=-379bp_to_ENST00000446500_5end | ||
|cluster_id=chr6:161454984..161455010,+ | |||
|coexpression_cluster_id=C4580 | |coexpression_cluster_id=C4580 | ||
|description=CAGE_peak_14_at_MAP3K4_5end | |description=CAGE_peak_14_at_MAP3K4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!3.03e-08!6;CL:0000945!4.85e-07!24;CL:0000826!4.85e-07!24 | |ontology_enrichment_celltype=CL:0000080!3.03e-08!6;CL:0000945!4.85e-07!24;CL:0000826!4.85e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.73e-29;1!CL:1000600;2.73e-29;1!CL:0000062;1.08e-13;9 | |ontology_enrichment_celltype_v019=CL:1001319;2.73e-29;1!CL:1000600;2.73e-29;1!CL:0000062;1.08e-13;9 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.37e-29,1;CL:1000600,2.37e-29,1;CL:0000062,2.18e-11,11;CL:0000375,2.18e-11,11;CL:0000335,2.18e-11,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.18e-11;11 | |ontology_enrichment_development_v019=CL:0000335;2.18e-11;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;4.95e-09;14 | |ontology_enrichment_disease_v019=DOID:1749;4.95e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.95e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002331!3.46e-08!10;UBERON:0000358!3.46e-08!10;UBERON:0000307!3.46e-08!10;UBERON:0000091!3.46e-08!10;UBERON:0000087!3.46e-08!10;UBERON:0007806!3.46e-08!10;UBERON:0008780!3.46e-08!10;UBERON:0005728!3.46e-08!10 | |ontology_enrichment_uberon=UBERON:0002331!3.46e-08!10;UBERON:0000358!3.46e-08!10;UBERON:0000307!3.46e-08!10;UBERON:0000091!3.46e-08!10;UBERON:0000087!3.46e-08!10;UBERON:0007806!3.46e-08!10;UBERON:0008780!3.46e-08!10;UBERON:0005728!3.46e-08!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.73e-29;1!UBERON:0001256;2.73e-29;1!UBERON:0001259;2.73e-29;1!UBERON:0001255;2.21e-15;2!UBERON:0001556;2.21e-15;2!UBERON:0002106;1.04e-10;3!UBERON:0003343;2.35e-08;4!UBERON:0004785;2.35e-08;4!UBERON:0001474;2.52e-07;18!UBERON:0002075;3.14e-07;18!UBERON:0004177;6.21e-07;5!UBERON:0005057;6.21e-07;5!UBERON:0000365;6.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004645;2.73e-29;1!UBERON:0001256;2.73e-29;1!UBERON:0001259;2.73e-29;1!UBERON:0001255;2.21e-15;2!UBERON:0001556;2.21e-15;2!UBERON:0002106;1.04e-10;3!UBERON:0003343;2.35e-08;4!UBERON:0004785;2.35e-08;4!UBERON:0001474;2.52e-07;18!UBERON:0002075;3.14e-07;18!UBERON:0004177;6.21e-07;5!UBERON:0005057;6.21e-07;5!UBERON:0000365;6.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.37e-29,1;UBERON:0001256,2.37e-29,1;UBERON:0001259,2.37e-29,1;UBERON:0001255,2.05e-15,2;UBERON:0001556,2.05e-15,2;UBERON:0002106,1.09e-10,3;UBERON:0004854,1.09e-10,3;UBERON:0009034,1.09e-10,3;UBERON:0002095,1.09e-10,3;UBERON:0004782,1.09e-10,3;UBERON:0003281,1.09e-10,3;UBERON:0009664,1.09e-10,3;UBERON:0002296,1.09e-10,3;UBERON:0005602,1.09e-10,3;UBERON:0001179,1.09e-10,3;UBERON:0006293,1.09e-10,3;UBERON:0003343,2.61e-08,4;UBERON:0004785,2.61e-08,4;UBERON:0002075,3.14e-07,18;UBERON:0000365,6.04e-07,5 | |||
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|short_description=p14@MAP3K4 | |short_description=p14@MAP3K4 | ||
}} | }} |
Latest revision as of 16:50, 16 September 2015
Short description: | p14@MAP3K4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MAP3K4_5end |
Coexpression cluster: | C4580_Saos2_oral_transitionalcell_splenic_cord_b_astrocytoma |
Association with transcript: | -379bp_to_ENST00000446500_5end |
EntrezGene: | MAP3K4 |
HGNC: | 6856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.37e-29 | 1 |
lower urinary tract cell | 2.37e-29 | 1 |
osteoblast | 2.18e-11 | 11 |
osteoprogenitor cell | 2.18e-11 | 11 |
mesenchyme condensation cell | 2.18e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.37e-29 | 1 |
wall of urinary bladder | 2.37e-29 | 1 |
mucosa of urinary bladder | 2.37e-29 | 1 |
urinary bladder | 2.05e-15 | 2 |
lower urinary tract | 2.05e-15 | 2 |
spleen | 1.09e-10 | 3 |
gastrointestinal system mesentery | 1.09e-10 | 3 |
stomach region | 1.09e-10 | 3 |
mesentery | 1.09e-10 | 3 |
gastrointestinal system serosa | 1.09e-10 | 3 |
mesentery of stomach | 1.09e-10 | 3 |
gut mesentery | 1.09e-10 | 3 |
dorsal mesentery | 1.09e-10 | 3 |
dorsal mesogastrium | 1.09e-10 | 3 |
peritoneal cavity | 1.09e-10 | 3 |
spleen primordium | 1.09e-10 | 3 |
mucosa of oral region | 2.61e-08 | 4 |
respiratory system mucosa | 2.61e-08 | 4 |
viscus | 3.14e-07 | 18 |
urothelium | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.95e-09 | 14 |