FFCP PHASE1:Hg19::chr15:45879595..45879626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26258 | |EntrezGene=26258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8549 | |HGNC=8549 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-162bp_to_uc001zvs.2_5end | |association_with_transcript=-162bp_to_uc001zvs.2_5end | ||
|cluster_id=chr15:45879595..45879626,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_2_at_PLDN_5end | |description=CAGE_peak_2_at_PLDN_5end | ||
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|ontology_enrichment_celltype=CL:0000763!4.46e-37!112;CL:0000049!4.46e-37!112;CL:0000766!1.18e-36!76;CL:0000557!7.03e-34!71;CL:0000839!1.32e-32!70;CL:0002009!7.55e-32!65;CL:0002194!8.42e-31!63;CL:0000576!8.42e-31!63;CL:0000040!8.42e-31!63;CL:0000559!8.42e-31!63;CL:0000037!1.03e-30!172;CL:0000566!1.03e-30!172;CL:0002032!2.11e-28!165;CL:0000837!2.11e-28!165;CL:0000738!1.13e-27!140;CL:0000988!1.83e-27!182;CL:0002057!9.22e-27!42;CL:0000860!6.89e-26!45;CL:0002031!1.40e-22!124;CL:0002087!5.69e-21!119;CL:0000134!2.92e-15!358;CL:0002320!3.92e-14!365;CL:0000219!2.29e-13!390;CL:0000048!1.14e-11!430;CL:0000723!6.38e-11!436;CL:0000034!7.37e-11!444 | |ontology_enrichment_celltype=CL:0000763!4.46e-37!112;CL:0000049!4.46e-37!112;CL:0000766!1.18e-36!76;CL:0000557!7.03e-34!71;CL:0000839!1.32e-32!70;CL:0002009!7.55e-32!65;CL:0002194!8.42e-31!63;CL:0000576!8.42e-31!63;CL:0000040!8.42e-31!63;CL:0000559!8.42e-31!63;CL:0000037!1.03e-30!172;CL:0000566!1.03e-30!172;CL:0002032!2.11e-28!165;CL:0000837!2.11e-28!165;CL:0000738!1.13e-27!140;CL:0000988!1.83e-27!182;CL:0002057!9.22e-27!42;CL:0000860!6.89e-26!45;CL:0002031!1.40e-22!124;CL:0002087!5.69e-21!119;CL:0000134!2.92e-15!358;CL:0002320!3.92e-14!365;CL:0000219!2.29e-13!390;CL:0000048!1.14e-11!430;CL:0000723!6.38e-11!436;CL:0000034!7.37e-11!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.75e-20;33!CL:0002057;1.75e-20;33!CL:0000473;6.35e-19;39!CL:0000234;6.35e-19;39!CL:0000576;1.27e-17;48!CL:0000766;1.77e-15;69!CL:0000763;1.55e-10;100!CL:0000738;9.18e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.75e-20;33!CL:0002057;1.75e-20;33!CL:0000473;6.35e-19;39!CL:0000234;6.35e-19;39!CL:0000576;1.27e-17;48!CL:0000766;1.77e-15;69!CL:0000763;1.55e-10;100!CL:0000738;9.18e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.28e-37,108;CL:0000049,7.28e-37,108;CL:0000766,8.41e-37,72;CL:0000557,4.95e-34,67;CL:0000839,9.73e-33,66;CL:0002009,4.81e-32,61;CL:0002194,5.32e-31,59;CL:0000576,5.32e-31,59;CL:0000040,5.32e-31,59;CL:0000559,5.32e-31,59;CL:0000037,3.06e-30,168;CL:0000473,8.88e-29,48;CL:0000234,8.88e-29,48;CL:0002032,6.10e-28,161;CL:0000837,6.10e-28,161;CL:0000988,1.34e-27,177;CL:0000738,2.90e-27,136;CL:0000860,9.22e-27,42;CL:0002057,9.22e-27,42;CL:0002031,3.45e-22,120;CL:0002087,1.38e-20,115;CL:0000134,2.20e-15,354;CL:0002320,3.04e-14,361;CL:0000219,1.85e-13,386;CL:0000048,1.58e-11,427;CL:0000723,8.77e-11,433;CL:0000034,1.02e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-19;42!CL:0000049;6.95e-11;108 | |ontology_enrichment_development_v019=CL:0002057;1.80e-19;42!CL:0000049;6.95e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.67e-33!102;UBERON:0003061!2.67e-33!102;UBERON:0002371!6.10e-32!80;UBERON:0001474!1.32e-31!86;UBERON:0004765!1.88e-29!101;UBERON:0001434!1.88e-29!101;UBERON:0002193!3.88e-29!112;UBERON:0002405!5.94e-19!115;UBERON:0002384!1.42e-14!375;UBERON:0002204!3.44e-13!167;UBERON:0000178!4.13e-07!15;UBERON:0000179!4.13e-07!15;UBERON:0000463!4.13e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.67e-33!102;UBERON:0003061!2.67e-33!102;UBERON:0002371!6.10e-32!80;UBERON:0001474!1.32e-31!86;UBERON:0004765!1.88e-29!101;UBERON:0001434!1.88e-29!101;UBERON:0002193!3.88e-29!112;UBERON:0002405!5.94e-19!115;UBERON:0002384!1.42e-14!375;UBERON:0002204!3.44e-13!167;UBERON:0000178!4.13e-07!15;UBERON:0000179!4.13e-07!15;UBERON:0000463!4.13e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.72e-07;15!UBERON:0000179;3.72e-07;15!UBERON:0000463;3.72e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.72e-07;15!UBERON:0000179;3.72e-07;15!UBERON:0000463;3.72e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.19e-33,98;UBERON:0003061,4.19e-33,98;UBERON:0002371,6.42e-32,76;UBERON:0001474,1.64e-31,82;UBERON:0002193,7.90e-29,108;UBERON:0001434,2.66e-28,100;UBERON:0004765,6.85e-28,90;UBERON:0002405,8.97e-23,93;UBERON:0002384,1.11e-14,371;UBERON:0002204,3.42e-12,167;UBERON:0000178,4.13e-07,15;UBERON:0000179,4.13e-07,15;UBERON:0000463,4.13e-07,15;UBERON:0003081,9.32e-07,203 | |||
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78449052 | ||
|short_description=p2@PLDN | |short_description=p2@PLDN | ||
}} | }} |
Latest revision as of 20:40, 17 September 2015
Short description: | p2@PLDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLDN_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -162bp_to_uc001zvs.2_5end |
EntrezGene: | PLDN |
HGNC: | 8549 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.28e-37 | 108 |
common myeloid progenitor | 7.28e-37 | 108 |
myeloid leukocyte | 8.41e-37 | 72 |
granulocyte monocyte progenitor cell | 4.95e-34 | 67 |
myeloid lineage restricted progenitor cell | 9.73e-33 | 66 |
macrophage dendritic cell progenitor | 4.81e-32 | 61 |
monopoietic cell | 5.32e-31 | 59 |
monocyte | 5.32e-31 | 59 |
monoblast | 5.32e-31 | 59 |
promonocyte | 5.32e-31 | 59 |
hematopoietic stem cell | 3.06e-30 | 168 |
defensive cell | 8.88e-29 | 48 |
phagocyte | 8.88e-29 | 48 |
hematopoietic oligopotent progenitor cell | 6.10e-28 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-28 | 161 |
hematopoietic cell | 1.34e-27 | 177 |
leukocyte | 2.90e-27 | 136 |
classical monocyte | 9.22e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.22e-27 | 42 |
hematopoietic lineage restricted progenitor cell | 3.45e-22 | 120 |
nongranular leukocyte | 1.38e-20 | 115 |
mesenchymal cell | 2.20e-15 | 354 |
connective tissue cell | 3.04e-14 | 361 |
motile cell | 1.85e-13 | 386 |
multi fate stem cell | 1.58e-11 | 427 |
somatic stem cell | 8.77e-11 | 433 |
stem cell | 1.02e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-33 | 98 |
blood island | 4.19e-33 | 98 |
bone marrow | 6.42e-32 | 76 |
bone element | 1.64e-31 | 82 |
hemolymphoid system | 7.90e-29 | 108 |
skeletal system | 2.66e-28 | 100 |
skeletal element | 6.85e-28 | 90 |
immune system | 8.97e-23 | 93 |
connective tissue | 1.11e-14 | 371 |
musculoskeletal system | 3.42e-12 | 167 |
blood | 4.13e-07 | 15 |
haemolymphatic fluid | 4.13e-07 | 15 |
organism substance | 4.13e-07 | 15 |
lateral plate mesoderm | 9.32e-07 | 203 |