FFCP PHASE1:Hg19::chr21:36208874..36208890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:36208874..36208890,+ | |||
|coexpression_cluster_id=C525 | |coexpression_cluster_id=C525 | ||
|description=CAGE_peak_at_chr21:36208874..36208890,+ | |description=CAGE_peak_at_chr21:36208874..36208890,+ | ||
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|ontology_enrichment_celltype=CL:0000181!8.09e-10!12;CL:0000417!8.09e-10!12;CL:0000668!8.09e-10!12;CL:0000414!8.09e-10!12;CL:0000412!8.09e-10!12;CL:0000182!8.09e-10!12;CL:0000136!2.57e-08!15;CL:0002150!8.69e-07!3;CL:0000861!8.69e-07!3 | |ontology_enrichment_celltype=CL:0000181!8.09e-10!12;CL:0000417!8.09e-10!12;CL:0000668!8.09e-10!12;CL:0000414!8.09e-10!12;CL:0000412!8.09e-10!12;CL:0000182!8.09e-10!12;CL:0000136!2.57e-08!15;CL:0002150!8.69e-07!3;CL:0000861!8.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002559;1.95e-15;5!CL:0002552;2.70e-15;5!CL:0002561;1.80e-10;2!CL:0002549;2.72e-10;2!CL:0002367;2.72e-10;2!CL:0000346;2.79e-07;3!CL:1000428;2.79e-07;3!CL:0000182;5.72e-07;12 | |ontology_enrichment_celltype_v019=CL:0002559;1.95e-15;5!CL:0002552;2.70e-15;5!CL:0002561;1.80e-10;2!CL:0002549;2.72e-10;2!CL:0002367;2.72e-10;2!CL:0000346;2.79e-07;3!CL:1000428;2.79e-07;3!CL:0000182;5.72e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.75e-15,5;CL:0002552,2.90e-15,5;CL:0002561,1.89e-10,2;CL:0002549,2.72e-10,2;CL:0002367,2.99e-10,2;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3;CL:0000182,5.15e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4929;1.43e-10;2 | |ontology_enrichment_disease_v019=DOID:4929;1.43e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.36e-11!11;UBERON:0006876!1.36e-11!11;UBERON:0007499!1.32e-09!25;UBERON:0008835!2.48e-09!22;UBERON:0003894!2.48e-09!22;UBERON:0009856!3.95e-09!26;UBERON:0009854!8.08e-09!23;UBERON:0009497!6.42e-08!25;UBERON:0000015!6.42e-08!25;UBERON:0002423!6.42e-08!25;UBERON:0006235!6.42e-08!25;UBERON:0004161!6.42e-08!25;UBERON:0005284!8.98e-08!5;UBERON:0002107!2.72e-07!19;UBERON:0006925!2.72e-07!19;UBERON:0008836!2.72e-07!19 | |ontology_enrichment_uberon=UBERON:0002200!1.36e-11!11;UBERON:0006876!1.36e-11!11;UBERON:0007499!1.32e-09!25;UBERON:0008835!2.48e-09!22;UBERON:0003894!2.48e-09!22;UBERON:0009856!3.95e-09!26;UBERON:0009854!8.08e-09!23;UBERON:0009497!6.42e-08!25;UBERON:0000015!6.42e-08!25;UBERON:0002423!6.42e-08!25;UBERON:0006235!6.42e-08!25;UBERON:0004161!6.42e-08!25;UBERON:0005284!8.98e-08!5;UBERON:0002107!2.72e-07!19;UBERON:0006925!2.72e-07!19;UBERON:0008836!2.72e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.95e-15;5!UBERON:0005933;1.80e-10;2!UBERON:0005942;1.80e-10;2!UBERON:0005932;1.80e-10;2!UBERON:0005629;2.72e-10;2!UBERON:0005358;2.72e-10;2!UBERON:0005969;2.72e-10;2!UBERON:0001886;2.72e-10;2!UBERON:0004086;2.72e-10;2!UBERON:0005282;2.72e-10;2!UBERON:0005281;2.72e-10;2!UBERON:0003956;2.72e-10;2!UBERON:0001828;6.34e-10;8!UBERON:0006876;1.84e-07;11!UBERON:0000412;2.79e-07;3!UBERON:0001992;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002073;1.95e-15;5!UBERON:0005933;1.80e-10;2!UBERON:0005942;1.80e-10;2!UBERON:0005932;1.80e-10;2!UBERON:0005629;2.72e-10;2!UBERON:0005358;2.72e-10;2!UBERON:0005969;2.72e-10;2!UBERON:0001886;2.72e-10;2!UBERON:0004086;2.72e-10;2!UBERON:0005282;2.72e-10;2!UBERON:0005281;2.72e-10;2!UBERON:0003956;2.72e-10;2!UBERON:0001828;6.34e-10;8!UBERON:0006876;1.84e-07;11!UBERON:0000412;2.79e-07;3!UBERON:0001992;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.75e-15,5;UBERON:0005086,1.75e-15,5;UBERON:0005933,1.89e-10,2;UBERON:0005942,1.89e-10,2;UBERON:0005932,1.89e-10,2;UBERON:0005629,2.72e-10,2;UBERON:0005358,2.72e-10,2;UBERON:0001886,2.72e-10,2;UBERON:0004086,2.72e-10,2;UBERON:0005282,2.72e-10,2;UBERON:0005281,2.72e-10,2;UBERON:0005969,2.99e-10,2;UBERON:0003956,2.99e-10,2;UBERON:0001828,6.63e-10,8;UBERON:0006876,1.90e-07,11;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0.134710672069688,0,0.454072282934794,1.15235184896,0.234321431833797,0.312160076830321,0,0.149448680551801,0.352303495931295,0.485618833104395,0,1.22492502752936,0,1.13658359293342,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.568272293612826,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,2.75596948241297,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.58620893471233,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0.947015026375446,0,0,0.457680136793847,0,0,0,0,4.49803112163605,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.502055437748735,0,0,0.320182037633146,0,16.1685363791856,0,0.122241444182866,0,0.665756774185513,0,0 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| ||
|short_description=p@chr21:36208874..36208890,+ | |short_description=p@chr21:36208874..36208890,+ | ||
}} | }} |
Latest revision as of 17:34, 28 July 2015
Short description: | p@chr21:36208874..36208890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:36208874..36208890, + |
Coexpression cluster: | C525_tubular_vagina_cervix_rectum_Placental_colon_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.75e-15 | 5 |
fibroblast of gingiva | 2.90e-15 | 5 |
outer root sheath cell | 1.89e-10 | 2 |
fibroblast of choroid plexus | 2.72e-10 | 2 |
trabecular meshwork cell | 2.99e-10 | 2 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
hepatocyte | 5.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.75e-15 | 5 |
hair follicle placode | 1.75e-15 | 5 |
hair root sheath | 1.89e-10 | 2 |
hair outer root sheath | 1.89e-10 | 2 |
bulb of hair follicle | 1.89e-10 | 2 |
vascular plexus | 2.72e-10 | 2 |
ventricle of nervous system | 2.72e-10 | 2 |
choroid plexus | 2.72e-10 | 2 |
brain ventricle | 2.72e-10 | 2 |
ventricular system of brain | 2.72e-10 | 2 |
ventricular system of central nervous system | 2.72e-10 | 2 |
reticulum trabeculare | 2.99e-10 | 2 |
aqueous drainage system | 2.99e-10 | 2 |
gingiva | 6.63e-10 | 8 |
vasculature of organ | 1.90e-07 | 11 |
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.43e-10 | 2 |