FFCP PHASE1:Hg19::chr20:18209026..18209030,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:18209026..18209030,+
|short_description=p@chr20:18209026..18209030,+
|description=CAGE_peak_at_chr20:18209026..18209030,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:18209026..18209030,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr20:18209026..18209030,+ | |||
|id=chr20:18209026..18209030,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.91e-15;2!CL:0000322;9.43e-11;3!CL:0000333;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.42e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.05e-29;1!DOID:326;2.05e-29;1!DOID:3978;2.05e-29;1!DOID:3394;2.05e-29;1!DOID:5844;2.05e-29;1!DOID:114;1.91e-15;2!DOID:3193;1.91e-15;2!DOID:3910;1.91e-15;2!DOID:962;1.91e-15;2!DOID:1192;9.43e-11;3!DOID:1287;2.18e-08;4!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.78e-29,1;DOID:326,1.78e-29,1;DOID:3978,1.78e-29,1;DOID:3394,1.78e-29,1;DOID:5844,1.78e-29,1;DOID:3910,1.33e-15,2;DOID:114,1.78e-15,2;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:1192,1.20e-10,3;DOID:1287,2.11e-08,4;DOID:3908,5.08e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0003714;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4!UBERON:0000013;5.86e-07;5!UBERON:0002410;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.33e-15,2;UBERON:0002173,1.33e-15,2;UBERON:0002186,1.33e-15,2;UBERON:0003714,2.74e-15,2;UBERON:0004821,7.42e-11,3;UBERON:0003215,7.42e-11,3;UBERON:0010368,7.42e-11,3;UBERON:0009911,7.42e-11,3;UBERON:0002299,7.42e-11,3;UBERON:0006524,7.42e-11,3;UBERON:0008874,7.42e-11,3;UBERON:0002169,7.42e-11,3;UBERON:0004894,7.42e-11,3;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
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| ||
|short_description=p@chr20:18209026..18209030,+ | |||
}} | }} |
Latest revision as of 12:08, 28 July 2015
Short description: | p@chr20:18209026..18209030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:18209026..18209030, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.33e-15 | 2 |
alveolar duct | 1.33e-15 | 2 |
bronchiole | 1.33e-15 | 2 |
neural tissue | 2.74e-15 | 2 |
pulmonary alveolus epithelium | 7.42e-11 | 3 |
alveolus | 7.42e-11 | 3 |
pulmonary lobule | 7.42e-11 | 3 |
lobule | 7.42e-11 | 3 |
alveolus of lung | 7.42e-11 | 3 |
alveolar system | 7.42e-11 | 3 |
pulmonary acinus | 7.42e-11 | 3 |
alveolar sac | 7.42e-11 | 3 |
alveolar wall | 7.42e-11 | 3 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
lung adenocarcinoma | 1.33e-15 | 2 |
heart disease | 1.78e-15 | 2 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |
cardiovascular system disease | 2.11e-08 | 4 |
non-small cell lung carcinoma | 5.08e-07 | 5 |