FFCP PHASE1:Hg19::chr17:37030127..37030161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3927 | |EntrezGene=3927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6513 | |HGNC=6513 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9W2 | |UniProt=C9J9W2 | ||
|association_with_transcript=0bp_to_ENST00000419929_5end | |association_with_transcript=0bp_to_ENST00000419929_5end | ||
|cluster_id=chr17:37030127..37030161,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_24_at_LASP1_5end | |description=CAGE_peak_24_at_LASP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000815!3.70e-11!2;CL:0000792!3.70e-11!2;CL:0002677!3.70e-11!2;CL:0002592!5.54e-08!3;CL:0000898!7.26e-08!3 | |ontology_enrichment_celltype=CL:0000815!3.70e-11!2;CL:0000792!3.70e-11!2;CL:0002677!3.70e-11!2;CL:0002592!5.54e-08!3;CL:0000898!7.26e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.12e-17;3 | |ontology_enrichment_celltype_v019=CL:0002592;1.12e-17;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000996!3.45e-21!1;UBERON:0001301!5.16e-21!1;UBERON:0003135!4.85e-17!11;UBERON:0000473!4.43e-11!8;UBERON:0003101!7.61e-09!22;UBERON:0000079!7.61e-09!22;UBERON:0001621!5.54e-08!3;UBERON:0006947!6.78e-08!3;UBERON:0004054!6.78e-08!3;UBERON:0003133!5.13e-07!48 | |ontology_enrichment_uberon=UBERON:0000996!3.45e-21!1;UBERON:0001301!5.16e-21!1;UBERON:0003135!4.85e-17!11;UBERON:0000473!4.43e-11!8;UBERON:0003101!7.61e-09!22;UBERON:0000079!7.61e-09!22;UBERON:0001621!5.54e-08!3;UBERON:0006947!6.78e-08!3;UBERON:0004054!6.78e-08!3;UBERON:0003133!5.13e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0003498;1.12e-17;3!UBERON:0005985;1.12e-17;3!UBERON:0001621;1.12e-17;3!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0003498;1.12e-17;3!UBERON:0005985;1.12e-17;3!UBERON:0001621;1.12e-17;3!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0001621,1.12e-17,3;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p24@LASP1 | |short_description=p24@LASP1 | ||
}} | }} |
Latest revision as of 20:41, 19 September 2015
Short description: | p24@LASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_LASP1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000419929_5end |
EntrezGene: | LASP1 |
HGNC: | 6513 |
UniProt: | C9J9W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
coronary artery | 1.12e-17 | 3 |
heart blood vessel | 3.60e-11 | 5 |
coronary vessel | 3.60e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |