FFCP PHASE1:Hg19::chr10:106113292..106113306,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000435434_5end | |association_with_transcript=26bp_to_ENST00000435434_5end | ||
|cluster_id=chr10:106113292..106113306,- | |||
|coexpression_cluster_id=C1561 | |coexpression_cluster_id=C1561 | ||
|description=CAGE_peak_3_at_ENST00000435434_5end | |description=CAGE_peak_3_at_ENST00000435434_5end | ||
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|ontology_enrichment_celltype=CL:0000766!5.83e-35!76;CL:0002057!4.10e-32!42;CL:0000839!1.19e-30!70;CL:0000557!1.77e-30!71;CL:0000860!3.01e-29!45;CL:0000763!4.66e-29!112;CL:0000049!4.66e-29!112;CL:0002009!2.91e-27!65;CL:0000738!1.92e-25!140;CL:0002194!8.34e-25!63;CL:0000576!8.34e-25!63;CL:0000040!8.34e-25!63;CL:0000559!8.34e-25!63;CL:0000037!4.42e-20!172;CL:0000566!4.42e-20!172;CL:0002032!1.12e-19!165;CL:0000837!1.12e-19!165;CL:0002031!2.55e-19!124;CL:0000988!5.55e-18!182;CL:0002087!1.55e-14!119;CL:0000453!1.10e-08!5;CL:0000134!2.65e-08!358;CL:0002320!3.03e-08!365;CL:0000990!3.52e-08!8;CL:0000094!4.92e-08!8;CL:0000219!4.91e-07!390 | |ontology_enrichment_celltype=CL:0000766!5.83e-35!76;CL:0002057!4.10e-32!42;CL:0000839!1.19e-30!70;CL:0000557!1.77e-30!71;CL:0000860!3.01e-29!45;CL:0000763!4.66e-29!112;CL:0000049!4.66e-29!112;CL:0002009!2.91e-27!65;CL:0000738!1.92e-25!140;CL:0002194!8.34e-25!63;CL:0000576!8.34e-25!63;CL:0000040!8.34e-25!63;CL:0000559!8.34e-25!63;CL:0000037!4.42e-20!172;CL:0000566!4.42e-20!172;CL:0002032!1.12e-19!165;CL:0000837!1.12e-19!165;CL:0002031!2.55e-19!124;CL:0000988!5.55e-18!182;CL:0002087!1.55e-14!119;CL:0000453!1.10e-08!5;CL:0000134!2.65e-08!358;CL:0002320!3.03e-08!365;CL:0000990!3.52e-08!8;CL:0000094!4.92e-08!8;CL:0000219!4.91e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-52;33!CL:0002057;3.29e-52;33!CL:0000473;4.29e-41;39!CL:0000234;4.29e-41;39!CL:0000766;3.42e-23;69!CL:0000576;2.55e-21;48!CL:0000771;4.55e-14;2!CL:0000094;3.68e-13;8!CL:0001014;3.71e-13;2!CL:0001016;3.71e-13;2!CL:0000763;9.62e-12;100!CL:0000081;1.35e-09;11!CL:0002087;1.44e-09;104!CL:0000775;1.54e-09;3!CL:0000738;3.58e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.29e-52;33!CL:0002057;3.29e-52;33!CL:0000473;4.29e-41;39!CL:0000234;4.29e-41;39!CL:0000766;3.42e-23;69!CL:0000576;2.55e-21;48!CL:0000771;4.55e-14;2!CL:0000094;3.68e-13;8!CL:0001014;3.71e-13;2!CL:0001016;3.71e-13;2!CL:0000763;9.62e-12;100!CL:0000081;1.35e-09;11!CL:0002087;1.44e-09;104!CL:0000775;1.54e-09;3!CL:0000738;3.58e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-48,42;CL:0002057,1.46e-48,42;CL:0000766,6.05e-48,72;CL:0000473,1.09e-46,48;CL:0000234,1.09e-46,48;CL:0002009,4.18e-43,61;CL:0000557,6.34e-43,67;CL:0002194,1.58e-36,59;CL:0000576,1.58e-36,59;CL:0000040,1.58e-36,59;CL:0000559,1.58e-36,59;CL:0000763,4.12e-36,108;CL:0000049,4.12e-36,108;CL:0000839,5.89e-36,66;CL:0000738,4.96e-30,136;CL:0002032,1.41e-24,161;CL:0000837,1.41e-24,161;CL:0002031,2.72e-24,120;CL:0000037,2.45e-23,168;CL:0000988,6.91e-22,177;CL:0002087,7.60e-19,115;CL:0000771,4.55e-14,2;CL:0001014,3.60e-13,2;CL:0001016,3.60e-13,2;CL:0000094,3.68e-13,8;CL:0000081,1.35e-09,11;CL:0000775,1.54e-09,3;CL:0000134,2.99e-08,354;CL:0002320,5.52e-08,361;CL:0000219,4.80e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-35;42!CL:0000049;9.23e-08;108 | |ontology_enrichment_development_v019=CL:0002057;5.75e-35;42!CL:0000049;9.23e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.28e-07;1!DOID:0070004;2.28e-07;1 | |ontology_enrichment_disease_v019=DOID:4960;2.28e-07;1!DOID:0070004;2.28e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,2.35e-07,1;DOID:0070004,2.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.08e-36!102;UBERON:0003061!3.08e-36!102;UBERON:0002193!2.07e-31!112;UBERON:0002371!2.80e-30!80;UBERON:0001474!3.68e-27!86;UBERON:0004765!8.60e-26!101;UBERON:0001434!8.60e-26!101;UBERON:0002405!1.21e-19!115;UBERON:0002204!3.07e-14!167;UBERON:0003081!3.54e-14!216;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15;UBERON:0002384!1.62e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!3.08e-36!102;UBERON:0003061!3.08e-36!102;UBERON:0002193!2.07e-31!112;UBERON:0002371!2.80e-30!80;UBERON:0001474!3.68e-27!86;UBERON:0004765!8.60e-26!101;UBERON:0001434!8.60e-26!101;UBERON:0002405!1.21e-19!115;UBERON:0002204!3.07e-14!167;UBERON:0003081!3.54e-14!216;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15;UBERON:0002384!1.62e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.39e-41,76;UBERON:0002390,1.40e-39,98;UBERON:0003061,1.40e-39,98;UBERON:0001474,1.29e-37,82;UBERON:0002193,1.77e-35,108;UBERON:0004765,6.87e-34,90;UBERON:0002405,1.18e-32,93;UBERON:0001434,4.66e-30,100;UBERON:0003081,1.59e-16,203;UBERON:0002204,3.88e-16,167;UBERON:0000926,8.78e-09,315;UBERON:0004120,8.78e-09,315;UBERON:0006603,8.78e-09,315;UBERON:0002384,1.28e-07,371 | |||
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| ||
|short_description=p3@ENST00000435434 | |short_description=p3@ENST00000435434 | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p3@ENST00000435434 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000435434_5end |
Coexpression cluster: | C1561_Mast_Eosinophils_Neutrophils_CD14_immature_Whole_Hep2 |
Association with transcript: | 26bp_to_ENST00000435434_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-48 | 42 |
myeloid leukocyte | 6.05e-48 | 72 |
defensive cell | 1.09e-46 | 48 |
phagocyte | 1.09e-46 | 48 |
macrophage dendritic cell progenitor | 4.18e-43 | 61 |
granulocyte monocyte progenitor cell | 6.34e-43 | 67 |
monopoietic cell | 1.58e-36 | 59 |
monocyte | 1.58e-36 | 59 |
monoblast | 1.58e-36 | 59 |
promonocyte | 1.58e-36 | 59 |
myeloid cell | 4.12e-36 | 108 |
common myeloid progenitor | 4.12e-36 | 108 |
myeloid lineage restricted progenitor cell | 5.89e-36 | 66 |
leukocyte | 4.96e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.41e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 2.72e-24 | 120 |
hematopoietic stem cell | 2.45e-23 | 168 |
hematopoietic cell | 6.91e-22 | 177 |
nongranular leukocyte | 7.60e-19 | 115 |
eosinophil | 4.55e-14 | 2 |
CD1a-positive Langerhans cell | 3.60e-13 | 2 |
immature CD1a-positive Langerhans cell | 3.60e-13 | 2 |
granulocyte | 3.68e-13 | 8 |
blood cell | 1.35e-09 | 11 |
neutrophil | 1.54e-09 | 3 |
mesenchymal cell | 2.99e-08 | 354 |
connective tissue cell | 5.52e-08 | 361 |
motile cell | 4.80e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.39e-41 | 76 |
hematopoietic system | 1.40e-39 | 98 |
blood island | 1.40e-39 | 98 |
bone element | 1.29e-37 | 82 |
hemolymphoid system | 1.77e-35 | 108 |
skeletal element | 6.87e-34 | 90 |
immune system | 1.18e-32 | 93 |
skeletal system | 4.66e-30 | 100 |
lateral plate mesoderm | 1.59e-16 | 203 |
musculoskeletal system | 3.88e-16 | 167 |
mesoderm | 8.78e-09 | 315 |
mesoderm-derived structure | 8.78e-09 | 315 |
presumptive mesoderm | 8.78e-09 | 315 |
connective tissue | 1.28e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.35e-07 | 1 |
myeloma | 2.35e-07 | 1 |