FFCP PHASE1:Hg19::chr21:42539291..42539316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100423023 | |EntrezGene=100423023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38366 | |HGNC=38366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-167bp_to_NR_036167_5end | |association_with_transcript=-167bp_to_NR_036167_5end | ||
|cluster_id=chr21:42539291..42539316,+ | |||
|description=CAGE_peak_3_at_MIR3197_5end | |description=CAGE_peak_3_at_MIR3197_5end | ||
|id=chr21:42539291..42539316,+ | |id=chr21:42539291..42539316,+ | ||
|ontology_enrichment_celltype=CL:0005020!9.31e-12!6;CL:0002138!9.31e-12!6;CL:0005022!9.31e-12!6;CL:0002274!2.59e-09!5;CL:0000457!2.59e-09!5;CL:0002191!2.59e-09!5;CL:0000097!2.59e-09!5;CL:0000831!2.59e-09!5;CL:0002028!2.59e-09!5 | |ontology_enrichment_celltype=CL:0005020!9.31e-12!6;CL:0002138!9.31e-12!6;CL:0005022!9.31e-12!6;CL:0002274!2.59e-09!5;CL:0000457!2.59e-09!5;CL:0002191!2.59e-09!5;CL:0000097!2.59e-09!5;CL:0000831!2.59e-09!5;CL:0002028!2.59e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.15e-42;6!CL:0000097;1.14e-23;5!CL:0000163;1.23e-13;9!CL:0002139;2.70e-11;24!CL:0000115;6.29e-07;36 | |ontology_enrichment_celltype_v019=CL:0002138;1.15e-42;6!CL:0000097;1.14e-23;5!CL:0000163;1.23e-13;9!CL:0002139;2.70e-11;24!CL:0000115;6.29e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.15e-42,6;CL:0002138,1.15e-42,6;CL:0005022,1.15e-42,6;CL:0000097,1.02e-23,5;CL:0002028,1.02e-23,5;CL:0000163,1.15e-13,9;CL:0002139,2.70e-11,24;CL:0000115,9.37e-08,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.15e-42;6 | |ontology_enrichment_development_v019=CL:0005022;1.15e-42;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.18e-14!9;UBERON:0007023!6.80e-09!115;UBERON:0001473!1.10e-08!8;UBERON:0004536!1.10e-08!8;UBERON:0006558!1.10e-08!8;UBERON:0002465!7.66e-07!10 | |ontology_enrichment_uberon=UBERON:0001737!4.18e-14!9;UBERON:0007023!6.80e-09!115;UBERON:0001473!1.10e-08!8;UBERON:0004536!1.10e-08!8;UBERON:0006558!1.10e-08!8;UBERON:0002465!7.66e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.02e-32;8!UBERON:0004536;3.02e-32;8!UBERON:0006558;3.02e-32;8!UBERON:0002465;5.53e-26;10!UBERON:0002405;4.06e-10;27 | |ontology_enrichment_uberon_v019=UBERON:0001473;3.02e-32;8!UBERON:0004536;3.02e-32;8!UBERON:0006558;3.02e-32;8!UBERON:0002465;5.53e-26;10!UBERON:0002405;4.06e-10;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.02e-32,8;UBERON:0004536,3.02e-32,8;UBERON:0006558,3.02e-32,8;UBERON:0002465,5.53e-26,10;UBERON:0002405,7.51e-08,93;UBERON:0002193,8.44e-07,108 | |||
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| ||
|short_description=p3@MIR3197 | |short_description=p3@MIR3197 | ||
}} | }} |
Latest revision as of 12:16, 18 September 2015
Short description: | p3@MIR3197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR3197_5end |
Coexpression cluster: | NA |
Association with transcript: | -167bp_to_NR_036167_5end |
EntrezGene: | MIR3197 |
HGNC: | 38366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.15e-42 | 6 |
endothelial cell of lymphatic vessel | 1.15e-42 | 6 |
vascular lymphangioblast | 1.15e-42 | 6 |
mast cell | 1.02e-23 | 5 |
basophil mast progenitor cell | 1.02e-23 | 5 |
endocrine cell | 1.15e-13 | 9 |
endothelial cell of vascular tree | 2.70e-11 | 24 |
endothelial cell | 9.37e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.02e-32 | 8 |
lymph vasculature | 3.02e-32 | 8 |
lymphatic part of lymphoid system | 3.02e-32 | 8 |
lymphoid system | 5.53e-26 | 10 |
immune system | 7.51e-08 | 93 |
hemolymphoid system | 8.44e-07 | 108 |