FFCP PHASE1:Hg19::chr21:35893958..35893980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1827 | |EntrezGene=1827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3040 | |HGNC=3040 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_ENST00000487434_5end | |association_with_transcript=-77bp_to_ENST00000487434_5end | ||
|cluster_id=chr21:35893958..35893980,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_RCAN1_5end | |description=CAGE_peak_9_at_RCAN1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.36e-12;12!CL:0001014;8.09e-09;2!CL:0001016;8.09e-09;2 | |ontology_enrichment_celltype_v019=CL:0000182;2.36e-12;12!CL:0001014;8.09e-09;2!CL:0001016;8.09e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.36e-12,12;CL:0001014,7.49e-09,2;CL:0001016,7.49e-09,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.75e-20;19!UBERON:0006925;1.75e-20;19!UBERON:0002423;1.37e-15;25!UBERON:0002365;1.47e-12;31!UBERON:0002330;1.47e-12;31!UBERON:0002368;6.62e-11;33!UBERON:0000949;5.36e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.75e-20;19!UBERON:0006925;1.75e-20;19!UBERON:0002423;1.37e-15;25!UBERON:0002365;1.47e-12;31!UBERON:0002330;1.47e-12;31!UBERON:0002368;6.62e-11;33!UBERON:0000949;5.36e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-20,19;UBERON:0006925,1.75e-20,19;UBERON:0008836,1.75e-20,19;UBERON:0008835,1.05e-17,22;UBERON:0003894,1.05e-17,22;UBERON:0009854,6.15e-17,23;UBERON:0007499,1.37e-15,25;UBERON:0009497,1.37e-15,25;UBERON:0000015,1.37e-15,25;UBERON:0002423,1.37e-15,25;UBERON:0006235,1.37e-15,25;UBERON:0004161,1.37e-15,25;UBERON:0009856,5.43e-15,26;UBERON:0002365,1.40e-12,31;UBERON:0002330,1.40e-12,31;UBERON:0002368,3.83e-11,35;UBERON:0000949,1.16e-08,45;UBERON:0003929,3.29e-07,54;UBERON:0005172,3.29e-07,54;UBERON:0005173,3.29e-07,54 | |||
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| ||
|short_description=p9@RCAN1 | |short_description=p9@RCAN1 | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p9@RCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RCAN1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -77bp_to_ENST00000487434_5end |
EntrezGene: | RCAN1 |
HGNC: | 3040 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.36e-12 | 12 |
CD1a-positive Langerhans cell | 7.49e-09 | 2 |
immature CD1a-positive Langerhans cell | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.75e-20 | 19 |
digestive gland | 1.75e-20 | 19 |
liver bud | 1.75e-20 | 19 |
hepatic diverticulum | 1.05e-17 | 22 |
liver primordium | 1.05e-17 | 22 |
digestive tract diverticulum | 6.15e-17 | 23 |
epithelial sac | 1.37e-15 | 25 |
epithelium of foregut-midgut junction | 1.37e-15 | 25 |
anatomical boundary | 1.37e-15 | 25 |
hepatobiliary system | 1.37e-15 | 25 |
foregut-midgut junction | 1.37e-15 | 25 |
septum transversum | 1.37e-15 | 25 |
sac | 5.43e-15 | 26 |
exocrine gland | 1.40e-12 | 31 |
exocrine system | 1.40e-12 | 31 |
endocrine gland | 3.83e-11 | 35 |
endocrine system | 1.16e-08 | 45 |
gut epithelium | 3.29e-07 | 54 |
abdomen element | 3.29e-07 | 54 |
abdominal segment element | 3.29e-07 | 54 |