FFCP PHASE1:Hg19::chr20:10750941..10750951,+: Difference between revisions
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|id=chr20:10750941..10750951,+
|short_description=p@chr20:10750941..10750951,+
|description=CAGE_peak_at_chr20:10750941..10750951,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:10750941..10750951,+ | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_at_chr20:10750941..10750951,+ | |||
|id=chr20:10750941..10750951,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.73e-13!13;CL:0002076!6.86e-12!43;CL:0000223!3.09e-10!59;CL:0002336!1.63e-08!1;CL:0002261!1.63e-08!1;CL:0002170!1.63e-08!1;CL:0002568!5.07e-08!1;CL:0002202!1.19e-07!9;CL:0002632!1.19e-07!9;CL:0000066!4.03e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!7.91e-13!14;DOID:3151!1.88e-08!1;DOID:3149!1.88e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.54e-32;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-32,14 | |||
|ontology_enrichment_uberon=UBERON:0004913!3.57e-08!1;UBERON:0003703!3.57e-08!1;UBERON:0001174!3.57e-08!1;UBERON:0004914!3.57e-08!1;UBERON:0002372!4.72e-08!1;UBERON:0001961!4.72e-08!1;UBERON:0001744!4.72e-08!1;UBERON:0001735!4.72e-08!1;UBERON:0001004!5.85e-08!72;UBERON:0004119!2.82e-07!169;UBERON:0000925!2.82e-07!169;UBERON:0006595!2.82e-07!169;UBERON:0000065!3.21e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.21e-13;4!UBERON:0004785;1.21e-13;4!UBERON:0000974;1.50e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.13e-13,4;UBERON:0004785,1.13e-13,4 | |||
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|short_description=p@chr20:10750941..10750951,+ | |||
}} | }} |
Latest revision as of 11:54, 28 July 2015
Short description: | p@chr20:10750941..10750951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10750941..10750951, + |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.13e-13 | 4 |
respiratory system mucosa | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.46e-32 | 14 |