FFCP PHASE1:Hg19::chr11:67608319..67608337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_ENST00000528260_5end | |association_with_transcript=-75bp_to_ENST00000528260_5end | ||
|cluster_id=chr11:67608319..67608337,+ | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_1_at_ENST00000528260_5end | |description=CAGE_peak_1_at_ENST00000528260_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.00e-69!5;CL:0000148!3.03e-13!10;CL:0000541!3.03e-13!10;CL:0000540!1.73e-10!6;CL:0000031!1.73e-10!6;CL:0000404!1.73e-10!6;CL:0000147!1.25e-09!14;CL:0000039!3.58e-09!7;CL:0000586!3.58e-09!7;CL:0000047!4.34e-08!8;CL:0000133!4.54e-08!59;CL:0000710!6.70e-07!20 | |ontology_enrichment_celltype=CL:0002322!1.00e-69!5;CL:0000148!3.03e-13!10;CL:0000541!3.03e-13!10;CL:0000540!1.73e-10!6;CL:0000031!1.73e-10!6;CL:0000404!1.73e-10!6;CL:0000147!1.25e-09!14;CL:0000039!3.58e-09!7;CL:0000586!3.58e-09!7;CL:0000047!4.34e-08!8;CL:0000133!4.54e-08!59;CL:0000710!6.70e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.74e-12;6!CL:0000404;2.74e-12;6!CL:0000039;8.99e-11;7!CL:0000586;8.99e-11;7 | |ontology_enrichment_celltype_v019=CL:0000540;2.74e-12;6!CL:0000404;2.74e-12;6!CL:0000039;8.99e-11;7!CL:0000586;8.99e-11;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.74e-12,6;CL:0000031,2.74e-12,6;CL:0000404,2.74e-12,6;CL:0000039,8.99e-11,7;CL:0000586,8.99e-11,7;CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.74e-12;6!UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | |ontology_enrichment_development_v019=CL:0000031;2.74e-12;6!UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | |ontology_enrichment_disease_v019=DOID:3095;3.77e-13;22!DOID:2994;3.77e-13;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.08e-29!2;UBERON:0002757!1.08e-29!2;UBERON:0010134!1.08e-29!2;UBERON:0002784!1.08e-29!2;UBERON:0005408!1.08e-29!2;UBERON:0001899!1.08e-29!2;UBERON:0003296!2.22e-15!4;UBERON:0010133!2.22e-15!4;UBERON:0001894!3.44e-09!7;UBERON:0006222!3.44e-09!7 | |ontology_enrichment_uberon=UBERON:0001905!1.08e-29!2;UBERON:0002757!1.08e-29!2;UBERON:0010134!1.08e-29!2;UBERON:0002784!1.08e-29!2;UBERON:0005408!1.08e-29!2;UBERON:0001899!1.08e-29!2;UBERON:0003296!2.22e-15!4;UBERON:0010133!2.22e-15!4;UBERON:0001894!3.44e-09!7;UBERON:0006222!3.44e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.35e-09;8!UBERON:0003135;2.47e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.35e-09;8!UBERON:0003135;2.47e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.35e-09,8;UBERON:0003135,2.47e-07,11 | |||
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|short_description=p1@ENST00000528260 | |short_description=p1@ENST00000528260 | ||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p1@ENST00000528260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000528260_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | -75bp_to_ENST00000528260_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.74e-12 | 6 |
neuroblast | 2.74e-12 | 6 |
electrically signaling cell | 2.74e-12 | 6 |
germ line cell | 8.99e-11 | 7 |
germ cell | 8.99e-11 | 7 |
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.35e-09 | 8 |
male reproductive organ | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |